Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0930 ATGGCCATGAGTACTGCCTCAGCTACTGGTTCTCACTCCCGAAATGGATTCCGTTTCTCGGACCAGGAAAATGGAGACTACAATCAACACGACTATGGTCAAGCTTTCTCAGTGGCCGGAAGTGAGGATTTTGATGGACAGAAAGCATTCAATAGCAATGAAGAGAAACGGAAAGATAAGAAAAGTTTAATGAGCAACGATCACGAAGACGACAATCTTTTGGCTGAGGCAAGGCAACCATTGTGGCGCAAGGTTCCAATAGCTTCAAGCCTAATCAACCCATATCGCATAGTCATAATCATGCGTGTGGTTATCCTAGTTTTCTTCTTCCACTTGCGCATCACAACTCCAGTGCATGATGCAATTGCCTTATGGATAATCTCTGTAGTCTGTGAAATCTGGCTTGCATTATCATGGATGGTTGACCAACTCCCCAAGTGGTTCCCTATTACTCGTGAAACTTACCTTGAACGTTTGTCCCTAAGGTTTGAGCGTGAAGGGGAGCCAAACCTTCTAGCCCCGGTTGATATCTTTGTAACCACTGCAGACCCTTTTAAGGAACCACCTATTATAACAGCAAACACGGTTTTATCAGTCTTGTCTGTTGATTACCCTGTTGATAAGGTTAGCTGCTATGTCTCAGATGACAGTGCTTCAATGCTTCTCTTTGATACCTTGTCAGAAACTGCCGAGTTTGCTAGAATATGGGTTCCTTTTTGTAACAAGTACAACATTGAGACAAGGGCACCTGAGTTTTATTTCTCTGAGAAACTTGATTACTTGAAAGATAAGGTGCACCCTACATTTGTTAAGGATCGCAGGGCTATGAAGAGAGAATACGAAGAATTCAAGGTGAAAATTAACATACTGGTTGCAAAGGCTCAGAAGAAACCAGAAGAAGGTTGGGTTATGAAAGACGGTAACCCATGGCCTGGGAGCAACATGGATGATCATCCAGGAATGATTCAGGTATGTCTAGGAAGTACTGGCTCACTGGATAAGGAGGGCAAAGAATTACCTCGGCTTGTGTATGTTTCCAGGGAAAAACGTCCTGGATATCAACACCACGGGAAAGCTGGTGCCATGAATGCTCTGGTTCGAGTTTCTGCTGTGCTTACCAATGCACCTTTTGCATTAAATCTGGATTGTGACCAATTCATCAATAATAGCAAGGTTCTTAGGGAGTCCATGTGCTTTTTAATGGACCCCCAACTTGGAAAGAAGTTCTGTTATGTCCAATTTCCAAAAAGGTTCAATGGCATCGATTGCAATGACAGATATGCTAATCACAATACTGTGTTCTTTGATATCAACATGAAATGCCTTGATGGGATTCAAGGTCCTCTTTATGTTGGTACTGGATGTGTGTTCAACAGGCAAGCATTATATGGCTTCGATCCACTTTCTGATAAAAGGCCAAAGATGAAGAGTTGCTGCTGGCCTTCATCCTGCAGCTGCTGTTATAGTGACTCCGAGTCTTCATCTNATGACGACATTGATCAGGAACTTGTAGACTTTGATGACGAAGAGGAAGAGGAATTATCCTTCATGTCCATGAAAAGTTTAGAGAAACGATTTGGACAATCACCGGTTTTCATTGCTTCTGCTTTGATGGAAGATGGTGGACTTCCCAAAGGCACAAACACCCGAGTACTGATTAAGGAAGCAATTCATGTTATAAGCTGTGACTATGAAGAGAAAACTGAATGGGGAAAAGAGATTGGCTGGCTATATGGTTCAGTCACAGAAGACATTTTAACTGGGTTTAACATGCATTGTAGAGGATGGAAATCAGTGTACTGCATGCCAAAGAAAGCAGCTTTTAAGGGATCTGCTCCTATAAATCTATCAGATCGATTACACCAAGTTCTGAAATGGGCTGCTGGTTCTACTGAGATTTTCTTTAGTGGCTATTGTCCTTTGTGGTATGGCTATAGTGGAAAACTGAAATGGCTACAGAGGTTGGCCTACATTAACTCCATCGTCTATCCATTTACTTCTATCCCCCTGCTGATCTACTGTACAATTCCTGCTGTCTGTCTTCTGACTGGAAAGTTCATCATCCCCACTCTGTCAAACCTTGCTAGCATTTGGTTAATGGCCTTATTTATCTCCATCATCTTAACTTGTGTGCTAGAGCTTCGTTGGAGTGGGGTTAGCATTCATGACTGGTGGCGCAATGAGCAATTCTGGGTCATTGGGGGTGTATCTTCACACCTTTTTGCTGTATTTCAAGGTCTTCTTAAAGTTGGAGGAGTAAACTCTAGCTTCACCGTGAGAGCAAAATCAGCACACGACACTTCTTTTGGACAGTTCCATCTCTTCAAGTGGACTAGTCTTCTAATCCCACCAACAAGTCTTGTGATCTTAAATATGGTGGGAATTGTGGCTGGAATCTCTGATGCCATTAACAATGGCTATGACTCATGGGGACCTTTCTTTGGGAAGCTTTTCTTCTCCTTGTGGGTAATTGTGCACTTGTATCCTTTCCTCAAAGGACTAATGGGAAAGCAAAACAGAACCCCTACCATTGTAGTCCTCTGGTCAATACTTGTAGCCATAATTTTCTCAATGATTTGGGTGAGAATTGATATTTTCTTGCCCAAGCAGACAGGTCCAGCACTCAGACAGTGTGGGATAAGATGCTAA 2649 0.4266 MAMSTASATGSHSRNGFRFSDQENGDYNQHDYGQAFSVAGSEDFDGQKAFNSNEEKRKDKKSLMSNDHEDDNLLAEARQPLWRKVPIASSLINPYRIVIIMRVVILVFFFHLRITTPVHDAIALWIISVVCEIWLALSWMVDQLPKWFPITRETYLERLSLRFEREGEPNLLAPVDIFVTTADPFKEPPIITANTVLSVLSVDYPVDKVSCYVSDDSASMLLFDTLSETAEFARIWVPFCNKYNIETRAPEFYFSEKLDYLKDKVHPTFVKDRRAMKREYEEFKVKINILVAKAQKKPEEGWVMKDGNPWPGSNMDDHPGMIQVCLGSTGSLDKEGKELPRLVYVSREKRPGYQHHGKAGAMNALVRVSAVLTNAPFALNLDCDQFINNSKVLRESMCFLMDPQLGKKFCYVQFPKRFNGIDCNDRYANHNTVFFDINMKCLDGIQGPLYVGTGCVFNRQALYGFDPLSDKRPKMKSCCWPSSCSCCYSDSESSSXDDIDQELVDFDDEEEEELSFMSMKSLEKRFGQSPVFIASALMEDGGLPKGTNTRVLIKEAIHVISCDYEEKTEWGKEIGWLYGSVTEDILTGFNMHCRGWKSVYCMPKKAAFKGSAPINLSDRLHQVLKWAAGSTEIFFSGYCPLWYGYSGKLKWLQRLAYINSIVYPFTSIPLLIYCTIPAVCLLTGKFIIPTLSNLASIWLMALFISIILTCVLELRWSGVSIHDWWRNEQFWVIGGVSSHLFAVFQGLLKVGGVNSSFTVRAKSAHDTSFGQFHLFKWTSLLIPPTSLVILNMVGIVAGISDAINNGYDSWGPFFGKLFFSLWVIVHLYPFLKGLMGKQNRTPTIVVLWSILVAIIFSMIWVRIDIFLPKQTGPALRQCGIRC* 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0930 882 MobiDBLite consensus disorder prediction 1 35 - -
Vra8g0930 882 MobiDBLite consensus disorder prediction 48 65 - -
Vra8g0930 882 SUPERFAMILY Nucleotide-diphospho-sugar transferases 186 699 IPR029044 -
Vra8g0930 882 Pfam Cellulose synthase 175 875 IPR005150 GO:0016020|GO:0016760|GO:0030244
Vra8g0930 882 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN 1 882 - -
Vra8g0930 882 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 281 470 IPR029044 -
Vra8g0930 882 MobiDBLite consensus disorder prediction 1 65 - -
Vra8g0930 882 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1 882 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0930 Vra-Chr8 20597182 20601773 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0930 66 882 Cell Wall Biosynthesis AT5G17420 68.530 0.0 1220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0930 K10999 - gmx:100777278 1573.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g0930 8 20597182 20601773 Vra8g0930 8 20597182 20601773 ECH