Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0873 ATGAAGAAGGTCACAACAATTGTTTCAATCTTTTTGATCGCGCTACTTTGTTTGCAGGAAGTCGTCCACGTATCTTCGTCACCATTCTTATATGCACGCCAGGTCTATGAGGAATCTTCTGGTGGAAGGAAACTTGAACAAGAACACGGACAAGAACATGCCCAAGAATTGCATTGCTCCAGGGAGAGAAGTAGGGCAGCTCGGAAAGTGATAGAGGAGTATTTGATACCATTTGTGGAACGAGAAAACTACCGGCTTTCAACTAAATGCAGACTTCACCCTGAAAATGATATATTTAGCGATCAGGAAGAGCATAAAATATTCGTAGATAGACATGAATGGCAGTGTGGATATTGTAAGAAAAGCTTTCGGGAAGAGAAATTTCTCGATCAGCATTTTGATAACAGACACTACAATCTTCTGAATGTGAGTCATGGTAAATGCTTGGCTGATTTATGTGGTGCGATGCATTGTGATGCTGTGACGAATTTCAGATCCCCCAGAAGCAAGTGTAATATGGCAGCTGCTGCAAGAAATCGTCATCTATGTGAGAGTCTTGCTGACAATTGTTTTCCTACAAGTGATGGTCCAGCAGCAGGCCGCCTTCATGAATTGTTTCTGCACCAATTTTGTGATGCTCACACTTGCTCAGGGAAACATAAACCCTTCTCTCGGGGAGGCAAGGACCAAAGTAGTTTCTTCCGCCTGGCTGCTGGAGCATTGATCTTGGTGCTACTTCCTGTGTTCTATCTTTTTCTTTATTTGATACAAAGTGATGTGAAGAATCGAACACAAGAGCTTCGTCGCATTCCAAAAGCTGGATGGAAAACAAAACCATCATGA 843 0.4259 MKKVTTIVSIFLIALLCLQEVVHVSSSPFLYARQVYEESSGGRKLEQEHGQEHAQELHCSRERSRAARKVIEEYLIPFVERENYRLSTKCRLHPENDIFSDQEEHKIFVDRHEWQCGYCKKSFREEKFLDQHFDNRHYNLLNVSHGKCLADLCGAMHCDAVTNFRSPRSKCNMAAAARNRHLCESLADNCFPTSDGPAAGRLHELFLHQFCDAHTCSGKHKPFSRGGKDQSSFFRLAAGALILVLLPVFYLFLYLIQSDVKNRTQELRRIPKAGWKTKPS* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0873 280 ProSiteProfiles Zinc finger C2H2 type domain profile. 114 137 IPR013087 -
Vra8g0873 280 ProSitePatterns Zinc finger C2H2 type domain signature. 116 137 IPR013087 -
Vra8g0873 280 PANTHER ZINC FINGER PROTEIN-RELATED 6 280 - -
Vra8g0873 280 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 6 280 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0873 34 280 C2H2 Transcription Factor Family AT5G63280 60.729 2.29e-104 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Vra8g0873 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0873 - - gmx:100780668 493.812