Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0834 ATGGGTAGCAACTTGCACCGACTGCTCAGAAGCTTCTGTTTGGGTACTGATTGGAAGTATGCCATCTTTTGGAAGCTCAAGCACCGGGCTCGGATGATCCTGACATGGGAGGATGCTTACTATNACAATCCCAATATTTGTGACTCTTCTGGAAATGAGAGCTGCCAGAATACATGGGAGCAGATTGGCAGTGCAGATTTTTCGCATGATCCTCTAGAATTAGCTGTGGCAAAGATGTCATATCATGTATATTCGTTAGGGGAAGGAATTGTTGGACAGGTAGCTGTTACAGGAAAACATAGGTGGATATTTGAAGATAATCAAGTTACAAGCTCTGGCCCATCTTTAGAGATTGCTGATGGATGGCAATCTCAATTTTCTGCTGGAATTAGGACCATTATTGTTATAGCCGTAGTCCCCATTGGAGTTGTTCAACTTGGTTCCTTGAATAAAGTTGCTGAAGATATGGGGGTTATAGCTTGTATCCGAAGTCTCTTTTTGTCTAATCAAGATTACACAATTCACCCTGATCCTAATCAAGTACAAAATATGCTGAAGAGTTCCTCGTCTGTGCTGGATTCAAAAACTTCAGAAAGTGTGCCTGCTTACTTGCACAATACAGAGAAAACCATGAAGCATGAATCACTGGATAATTTAATGCCCTTTCAAGGTCCTAGGAACAATTATTCACCTCATGCTGTGAATCAGAAGATGACTGTTGATGAGGCCAAGCATGAGAGGCCAGAATTATACGGTGATGGAAATTTCATTTTGCTTCAGTCAATGTCTAATATGATGAATGTGGAGCAGCAGAAATTTTTAGGGATGAGACCTATAAATGAGAGAAAGTTTGAATTGAACAGTAGTGGCTGTGATGATACAAGTGTGGGATCGGGAAAAAATTTGTCATCTTTTTTACATAATTTGGTTACGGGTAATAATTGTGTCAACGATTTAGTATGTCCATCCAAAAATGTTGGCGTTGATTCTGTATCCTTCTCAGAATTTCTTGATACAGCTGTCTGTGAAAGTGAAAAGTTTCATTATGTAGATATCAACCAAAATGGAGTGTTGAACTGGACCAGACCTTCAGATGCATACTCTCGAAAAGATACTGGGAAGTCGGAGTTGCAGACTGAACCTTGTTCCAAGGATACCGCATACACTTTGAAGTTTCCTGCTGGCTATGAGTTACATGAAGCACTTGGGCCAAGTTTTCTAAGACGGATCAAATATTTTGATTGGGCAGTGAAGGCAAATCAAGATGTTAAAGCCGCTGAGATGTCAGATGAGCTAAGCTGTAGCCAATTGACTTCTGAATCTCAGCCAGAGCATCTCTTAGAGGCTATGGTGGCTAACATCTGCCATAGTAATAATAATGTCAATAGGGAGTTGTCATTTTCTACAACAATGCAGGCTGCAATAGCCTCAGGAAGTAATCCCGAGGATTCCATCCACACTGTCCACACCATTAATTCTGATAGCTGTTCAATAGATCAGCCTCACGTTGGTAGAGAGGAAAAACATTATAATTTGGGTTCATCTGGGATATGTGGTATAATGTCTCCAAAGGGTTTTTCTTCTACATGTCCTAGTTCATGTAGTGAACAATTTGAGAGGTCTTCTGAACCAACTAAGAACAGCAAGAAGAGGGCTAGGCCTGGTGAAAGTTGTAGGCCTAGACCAAGGGACAGACAACTTATCCAAGATCGTATTAAGGAGTTGAGGGAACTGGTACCAAATGGAGCAAAGTGCAGTATTGATTCGCTACTGGAGTGCACCATAAAACACATGCTCTTTCTCAAGAATGTAACCAAGGACAAGCTAAATAAATTTACGGACACAAAGACTAAGTTGCATCACATGGAAAAAGATATTAACGGATCATCAAGACATCAACAAGGTTCTAGTTGGGCAATGGAAGTCGGAGGCCATCTGAAAGTTCGTTCAATATTAGTGGAGAATCTTAATAAGAATGGCCAGATGCTTGTTGAGATGTTGTGTGAGGAGTGTAGCCATTTTCTTGAGATAGCAGAAGCCATCAGAAGCATGGGTCTGACAATATTGAATGGGGCAACAGAAGCTCATGGCGAGAAGACATGTATATGTTTTGTGGTTGAGGCAGGGTCAGAAGGCCAAAACAACAGAAATTTACACAGATTGGATATCTTGTGGCCGCTTGTTCAATTACTGCAATCCAAGAGCACTATGTATTCATAA 2220 0.409 MGSNLHRLLRSFCLGTDWKYAIFWKLKHRARMILTWEDAYYXNPNICDSSGNESCQNTWEQIGSADFSHDPLELAVAKMSYHVYSLGEGIVGQVAVTGKHRWIFEDNQVTSSGPSLEIADGWQSQFSAGIRTIIVIAVVPIGVVQLGSLNKVAEDMGVIACIRSLFLSNQDYTIHPDPNQVQNMLKSSSSVLDSKTSESVPAYLHNTEKTMKHESLDNLMPFQGPRNNYSPHAVNQKMTVDEAKHERPELYGDGNFILLQSMSNMMNVEQQKFLGMRPINERKFELNSSGCDDTSVGSGKNLSSFLHNLVTGNNCVNDLVCPSKNVGVDSVSFSEFLDTAVCESEKFHYVDINQNGVLNWTRPSDAYSRKDTGKSELQTEPCSKDTAYTLKFPAGYELHEALGPSFLRRIKYFDWAVKANQDVKAAEMSDELSCSQLTSESQPEHLLEAMVANICHSNNNVNRELSFSTTMQAAIASGSNPEDSIHTVHTINSDSCSIDQPHVGREEKHYNLGSSGICGIMSPKGFSSTCPSSCSEQFERSSEPTKNSKKRARPGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLECTIKHMLFLKNVTKDKLNKFTDTKTKLHHMEKDINGSSRHQQGSSWAMEVGGHLKVRSILVENLNKNGQMLVEMLCEECSHFLEIAEAIRSMGLTILNGATEAHGEKTCICFVVEAGSEGQNNRNLHRLDILWPLVQLLQSKSTMYS* 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0834 739 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 1 739 - -
Vra8g0834 739 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 552 601 IPR011598 GO:0046983
Vra8g0834 739 MobiDBLite consensus disorder prediction 542 566 - -
Vra8g0834 739 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 739 IPR043561 GO:0003700|GO:0006355
Vra8g0834 739 MobiDBLite consensus disorder prediction 537 566 - -
Vra8g0834 739 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 166 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0834 Vra-Chr8 17247183 17259377 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0834 1 735 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 40.597 5.71e-151 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0834 - - gmx:100777740 1184.86