Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0833 ATGACTATATATTTATGTGTATTATTGCAATATGTGATCGAATCAGCCATCAACTTTCCAGAGGCTTCATTAAGCAAAGGGATGAACCCTCATGTCTTTGTTACCTATAGGCACGTTATTGGGGGCATAGCTGTGCTTCCTTTTGCTTATGTTCGTGAAAGAAAATTATGGCCAAAGTTGACTATGACAATGTTCATTGAGCTATTTTTTCTTTCCCTCTTCGGGACCAGTCTTACCCTGAACATGTTTTTCGCAAGCTTGAAATATACCACTCCTTCCTTTGATGCATCCATGACTAACACAATCTCATCCCTTACTTTTATACTTGCAGTTGCACTCAGATTAGAGGTTGTTGATGTTAAGAAGCCTCGTGGAGTGGCTAAAGTTTTTGGAACCCTGTTATCTTTGATTGGTGCATTGATAATGACTTTGTATAAAGGGCATACGATACAAAGCTTACGGGGTGCCCCGTTCCACGTCAGAGGCAATTTTGTTCATAATAACTGGATTAAAGGATCACTTTTGTCTGGTGCAAGTTGCATATCATGGTCTTTATGGTTCATACTACAGGCAGTCATAGCGAAGAAATATCAAGCACAACTGTCTCTAACAGTTTGGATAAATTGCATGGGTGCAGCACAGTCTGCCATCTTCGCTGTAATCGTGGAACACAGACCTAGAGCATGGCTCATTACATCCACTGTGGAACTCTGTTGCGTTTTTTATGCTGGAGCTATATGTGGTGGTTTTGTTATATTCATCCAATTCTGGACTGCAGAACAAAAAGGGCCAGTCTTTGTCAGTATGTTTAATCCCCTTGGAACAATTTTGGTGGCTATCTTAGCATATTTTCTATTTGGTGAACAACTCCACACAGGCAGTTTATTGGGAGTAGTGTTTGTGATAATTGGTCTATACTTGCTGTTATGGGGAAAAGAAAGTGATCGAGATTACAACTCACAGGAATCTTCAGCAACAGATGTTGAGCAGAGAGAATGTAAGACACAAATAAAGATTTCGGAGCAAGAGGTACCGCAGAGGAACTTATCACAGGACACCAATTAA 1065 0.4028 MTIYLCVLLQYVIESAINFPEASLSKGMNPHVFVTYRHVIGGIAVLPFAYVRERKLWPKLTMTMFIELFFLSLFGTSLTLNMFFASLKYTTPSFDASMTNTISSLTFILAVALRLEVVDVKKPRGVAKVFGTLLSLIGALIMTLYKGHTIQSLRGAPFHVRGNFVHNNWIKGSLLSGASCISWSLWFILQAVIAKKYQAQLSLTVWINCMGAAQSAIFAVIVEHRPRAWLITSTVELCCVFYAGAICGGFVIFIQFWTAEQKGPVFVSMFNPLGTILVAILAYFLFGEQLHTGSLLGVVFVIIGLYLLLWGKESDRDYNSQESSATDVEQRECKTQIKISEQEVPQRNLSQDTN* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0833 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 36 147 - -
Vra8g0833 354 Pfam EamA-like transporter family 172 309 IPR000620 GO:0016020|GO:0016021
Vra8g0833 354 Pfam EamA-like transporter family 11 143 IPR000620 GO:0016020|GO:0016021
Vra8g0833 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 220 313 - -
Vra8g0833 354 PANTHER WAT1-RELATED PROTEIN 5 340 IPR030184 GO:0016021|GO:0022857
Vra8g0833 354 PANTHER WAT1-RELATED PROTEIN 5 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0833 Vra-Chr8 17223291 17225675 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0833 23 324 Nodulin-like Gene Family AT3G18200 39.474 3.80e-73 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0833 - - gmx:100808275 564.688