Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0817 ATGATGCTTTTGTCTTTCTTTGGCAAGATTCACGATGGCCTCTCAGAAGTGTTAGCACCGATAAGAAGATCACTAACACAGATGATCAACGAAGATCCACTGAATGCATCACCACAAGTGCCAGATGACGTTTTAGAAGGACACTTTGTGGTTGTTGCTAAAAAGGGTGAAGAAACCAAACGGTTTGTTATGGAGTTGAACTATTTGTGTAACCCTGCATTTTTGAGACTGCTGGAGAGAGCAAGAGAAGAGTTTGGTTTCAGGCAAAAGGGAGTTTTGGAAATTCCCTGCCACCCTCAAGAACTAGAGAAGATTCTAGAAGAAAGAAGAGATCAAAGTGTGGGAGATGGAAGCAAATTAACAGATTCAATTCACATGAGTTGA 384 0.4115 MMLLSFFGKIHDGLSEVLAPIRRSLTQMINEDPLNASPQVPDDVLEGHFVVVAKKGEETKRFVMELNYLCNPAFLRLLERAREEFGFRQKGVLEIPCHPQELEKILEERRDQSVGDGSKLTDSIHMS* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0817 127 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 1 110 - -
Vra8g0817 127 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 110 IPR003676 GO:0009733
Vra8g0817 127 MobiDBLite consensus disorder prediction 107 127 - -
Vra8g0817 127 Pfam Auxin responsive protein 38 107 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0817 Vra-Chr8 16769945 16770328 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0817 37 107 Calmodulin-binding Proteins AT5G20810 42.254 2.88e-12 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0817 - K14488 gmx:100809715 175.252