Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0816 ATGCACTGTTTTATATCAGAAGAAAACAAAGTCCGATCGAAGATGCTTAGGTTTTTTGTTGGGAGGATACAAAAGGGTCTATCACTGTTTGTGGCTAGAAGGCCTGCATTCAGCTACTTGAGTGAAGATGGTGCCCCAAATGAGGCACCAGATGATGTTATGGAAGGTTATTTTGCTGTTGTTGCAATGAAGGGTAAAGAAAGACAAAGGTTCATTGTTGGGTTGGATTACTTGTCTGATCCTGCATTCTTGGGACTGTTGGATCAAGCTCAAGAAGAGTATGGTTTCCAACACCAGGGAGCTCTTGCACTCCCTTGTCGACCTCAGGAGTTGCAGAAGATTCTAGATGCTCCAAAAGCATAA 363 0.4325 MHCFISEENKVRSKMLRFFVGRIQKGLSLFVARRPAFSYLSEDGAPNEAPDDVMEGYFAVVAMKGKERQRFIVGLDYLSDPAFLGLLDQAQEEYGFQHQGALALPCRPQELQKILDAPKA* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0816 120 Pfam Auxin responsive protein 45 116 IPR003676 GO:0009733
Vra8g0816 120 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 15 119 - -
Vra8g0816 120 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 15 119 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0816 Vra-Chr8 16757683 16758573 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0816 48 115 Calmodulin-binding Proteins AT3G43120 45.588 9.54e-14 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0816 - K14488 gmx:100818734 167.162