Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0812 ATGGGAGGAAAATGTCCGCACCGGAACGTGAAGAAGAGAAGATATTCTCACAAGACAGCACGCCGAACCAAATTTGAGTTGAAAGGGGACGATATGGTTTACGCGCAGCTAAACAAACCCGATGAAGAGATAACCCCTTTACCCGTAGACGAAGATTTGCCTGGGATGGGACAGCACTATTGCCCTCACTGCGATCGGTACTTTTCCAATACAACTGTGAGGGATGAACACTTTAAGACCAAACGACACAAGAAGCGTGTAAAACAAATGATGGGTCCTGCACCACATACTCAACTTGATGCCGAATTAGCTGCAGGGATGGGTATGCCAGACAATGGACCAAAGCTGATGTCTATGTAA 360 0.4667 MGGKCPHRNVKKRRYSHKTARRTKFELKGDDMVYAQLNKPDEEITPLPVDEDLPGMGQHYCPHCDRYFSNTTVRDEHFKTKRHKKRVKQMMGPAPHTQLDAELAAGMGMPDNGPKLMSM* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0812 119 ProSiteProfiles Zinc finger matrin-type profile. 59 89 IPR000690 GO:0003676|GO:0005634|GO:0008270
Vra8g0812 119 MobiDBLite consensus disorder prediction 1 20 - -
Vra8g0812 119 PANTHER EXPRESSED PROTEIN 1 119 - -
Vra8g0812 119 SUPERFAMILY beta-beta-alpha zinc fingers 46 110 IPR036236 -
Vra8g0812 119 Pfam Zinc-finger double-stranded RNA-binding 58 84 IPR022755 -
Vra8g0812 119 ProSitePatterns Zinc finger C2H2 type domain signature. 61 83 IPR013087 -
Vra8g0812 119 Gene3D Classic Zinc Finger 46 109 - -
Vra8g0812 119 SMART ZnF_U1_5 56 90 IPR003604 GO:0003676|GO:0008270
Vra8g0812 119 MobiDBLite consensus disorder prediction 76 95 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0812 3 118 C2H2 Transcription Factor Family AT2G36930 76.724 2.30e-64 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0812 K14821 - gmx:100499707 239.965