Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0805 ATGGAAGCCACTTCCATAACGTCGTTGTTGAAGGGCTTTTGTGATCACACACGATGGAAATATGCTGTTTTTTGGAAGCTTAACCACCATTTTCCTATGGTTGTTGGTAAAGTAGCTCTTGCCAGGGATCATTGTTGGGTTTCCTGTGAGGATATTCTTACCCCTAAATTTGACACTGATTTAATCACAGAGTGTCCTGATGAGTGGCTTCTTCAAATTGCATGTGGCATCAAGACTATTGTGCTTGTACCGGTTCTTCCACTAGGGGTTTTGCAGTTTGGTTCATTTGAAGAGGTTGCTGAAGACCTGGAATTCGTTACCACTGTGAAGGGTAAGCTCCAATCCATTGATTGCATGGAAGCAAATATTACCCCTTTGAACATGGGAACTGATTATCAAGATTGGTCGGACCTAATGCATAATTTGATGAATAGCTTGGACGAATCATCTTCTGTTACTAAAACTATATGGAAAAGTGAAGTTTCAACCAGTACTGCTTCTAACAGTGCAAATGGTTCAACAAGGCTGAACCCAACAATGCTATCATTTATTCAAGATGACTGTTCTGTGTCAAGACAAAATCTACTAAAATCTCTGAAAAGAGAAAATGGCAATGAGATAGGTTCCTCTTCATTTGATATGTCAACTGTTCCTAGACATATTAGTAAGATGGAGACAAAACCAAATCACATGGAAGCAGAGATGTGGTCCTGGTCGGTTTTTGAAGAGATGTCAAACGGATTAGACTCTTTGTCTGTTAAAAATATGACAGAGAAACAGTTTGGTGGCACTGAAAGTGGTTATTATGATGCTAAGAATATCAATGACTTCACTTTTCCCTCAGAGTCAGAATTGCACAAAGCACTTGGATCAGTTGCATACTCTGTTGGTGAAGCATACCATACCTCATGTCTGATAACCAATAAAAAAGAGAGTGATCATATTAAAGGTTTTGAGTTTCCCGAAGATCTTGATCCTGAATATCTTTTAGATGCTGTTGTTGGCAATTTATGTAGTGCTGCAGATGATACTTCTAGTATTTCAAACAGTATCAGATCTTTTACAACTTTGCCAACAGAGATTAGCGGTTCCATTCCAAAAAATTATTCAGAAGAAAGCTACACTTTGATTGTGGATAATTCAGATGTGAAGAATGATCTTGTGCCTGCAGTTTCCTTCAAGAGAAAATATGAATTTTCCAACCATTTTACATCATCTTTTGATGGAAATGGAAGCTTATTGATTGACGAGGTGCCACAGGAAAAGGAAGATGTTCATATGCTTCCAATCAATGGACCAAAGCTCTCTAGCACAAACAAGAAAAGAACAAGAGTTGTTAACAACCAAAAGGCAAGGCCAAGAGATAGACAGCTTATCATGGACAGAATGAAGGAGTTGAGAGAACTCGTCCCAGATGGTGGAAGGTGTAGCATTGACAACCTCTTGGAACGGACCATAAAGCACATGCTCTACTTGAGAAAGATAACAAGTCAGGCCGAGAAACTGAAACGATTTGCCAATAGGACGGTTGGTGAGAGCAAAAGACAGAAAATGAACGGTAGCCACCCAGGAAGGAGCTGTGCATTTGACTTTGAAAGTGAACTAGCATGGCCTATAGTCATAGAAGATCTGGAATGCACAGGGCATATGCTCATTGAGATGATATGCAATGAGCATGGCCTTTTCTTGGAGATTGCTCAGGTGATCCGAAAGCTAGATGTCACCATCTTGAAAGGGATCTTGGAAAATCGTTCTAGCGACAGCTGGGCTTGTTTCATTGTTGAGGTTCCTAGAGGCTTTCACAGAATGGATGTTCTATGTCCATTACTGCATCTTCTGCAGCTGAGGAGAAACCCTATCTCATACAAAAGCTGA 1875 0.4011 MEATSITSLLKGFCDHTRWKYAVFWKLNHHFPMVVGKVALARDHCWVSCEDILTPKFDTDLITECPDEWLLQIACGIKTIVLVPVLPLGVLQFGSFEEVAEDLEFVTTVKGKLQSIDCMEANITPLNMGTDYQDWSDLMHNLMNSLDESSSVTKTIWKSEVSTSTASNSANGSTRLNPTMLSFIQDDCSVSRQNLLKSLKRENGNEIGSSSFDMSTVPRHISKMETKPNHMEAEMWSWSVFEEMSNGLDSLSVKNMTEKQFGGTESGYYDAKNINDFTFPSESELHKALGSVAYSVGEAYHTSCLITNKKESDHIKGFEFPEDLDPEYLLDAVVGNLCSAADDTSSISNSIRSFTTLPTEISGSIPKNYSEESYTLIVDNSDVKNDLVPAVSFKRKYEFSNHFTSSFDGNGSLLIDEVPQEKEDVHMLPINGPKLSSTNKKRTRVVNNQKARPRDRQLIMDRMKELRELVPDGGRCSIDNLLERTIKHMLYLRKITSQAEKLKRFANRTVGESKRQKMNGSHPGRSCAFDFESELAWPIVIEDLECTGHMLIEMICNEHGLFLEIAQVIRKLDVTILKGILENRSSDSWACFIVEVPRGFHRMDVLCPLLHLLQLRRNPISYKS* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0805 624 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 443 492 IPR011598 GO:0046983
Vra8g0805 624 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 34 623 IPR043561 GO:0003700|GO:0006355
Vra8g0805 624 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 34 IPR043561 GO:0003700|GO:0006355
Vra8g0805 624 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1 1 34 - -
Vra8g0805 624 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1 34 623 - -
Vra8g0805 624 MobiDBLite consensus disorder prediction 431 451 - -
Vra8g0805 624 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 34 110 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0805 Vra-Chr8 16278108 16284139 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0805 257 618 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 34.872 4.86e-50 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0805 - - gmx:100820605 887.871