Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0790 ATGTTCCTTGTTTTAAGAACTAAGAAAATGAAGACGATAATAGAATGCTGTGTCTCTGCAAGTGCCACACGTGTCTGTGGCCTTTTGCCATACAGAAATTATTCATGTAATAGCATGCTTGCAACTTGTTCAGCATCATCCTCAACAACAAGAAGAACTTTATCTCTTTCTCTCATCTCCACCACTTTCTCTGCATTCATCTTCTCACTTTCTCCTCCTTCTTCCTCTTCTTCTTCTTCTTCAAAATTACCCTTATCAAAGTTCTTCGAGATCCCTGATTCAGGTGGAGTTAAGGCTTTGGACCTCCTTGATGGTTCAGGTGAAGTTCCCTCAGATGGGGACCAGGTTGCAATTCACTACTATGGCAGGCTGGCAGCAAAACAGGGATGGCGTTTTGACTCAACCTATGACCACAAAGATGACAATGGCGAACCCAATCCATTTGTCTTTGTCCTTGGCTCTGGCAAGGTTATAGCTGGAATTGATGTGGCAGTGAGATCGATGAAAGTAGGAGGTATTCGTAGAGTCATCATACCCCCATCACTTGGGTATCAAAACACATCACAAGAGCCAATCCCACCGAACTTCTTTGACAGGCAAAGGTTGTTCACTACCATTTTTAATCCAACTCGCCGTGCAAATGGAGAAGGCTCCACTTTAGGAACAGTTATATTTGATATTGAGCTGGTTAGTGTGAGGCATCCGTGA 708 0.4336 MFLVLRTKKMKTIIECCVSASATRVCGLLPYRNYSCNSMLATCSASSSTTRRTLSLSLISTTFSAFIFSLSPPSSSSSSSSKLPLSKFFEIPDSGGVKALDLLDGSGEVPSDGDQVAIHYYGRLAAKQGWRFDSTYDHKDDNGEPNPFVFVLGSGKVIAGIDVAVRSMKVGGIRRVIIPPSLGYQNTSQEPIPPNFFDRQRLFTTIFNPTRRANGEGSTLGTVIFDIELVSVRHP* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0790 235 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 109 230 IPR001179 GO:0003755
Vra8g0790 235 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 113 233 IPR001179 GO:0003755
Vra8g0790 235 SUPERFAMILY FKBP-like 94 233 - -
Vra8g0790 235 Gene3D - 79 232 IPR046357 GO:0003755
Vra8g0790 235 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP17-1, CHLOROPLASTIC 37 234 IPR044197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0790 Vra-Chr8 15593589 15596124 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0790 72 233 Calmodulin-binding Proteins AT5G48570 31.902 4.32e-15 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0790 - - gmx:100808927 349.362