Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0781 ATGAGGGAGAACGACACTCCTATGGAGCAACAACTTGGATTAGTGTGTGTGAAAGTGTTAGGAAGAGGGATTAATGTAAATGTAACAGAGGGGAGAAGTACTTCTATCCTTTTTTTCTTACTATTATATGGAACTGGTTTGCCCGAGATTGAAGAGGCTACGAGTAACTTTGATGAAAGCCGAAGAATAGGAAGTGGTGGATACGGAAGTGTTTATTTTGGAGTGTTAGGGAACAAGGAAGTTGCTTCGAAGAAAATGAGGTCCAATAAATCTAAAGAGTTTTATGCAGAACTCAAGGTGGAGCTTTTGGGATATGCAAACGGAGAAGGTGACCTCTATTTGATGTATGAGTACGTTCCAAATGGATCTCTCAATGATCATCTTCATAATCCATTACTGAAAGGTCTTGAATATATACATGATTATACAAAAGCACGATGTGTGCACCGTGACATAAAGAGTAGCAATATTCTACTTAATGACAAATTCAGAGCAAAGGTGGGAGATTTTGGACTTGCAAAGCTGGTAGACAAAACCGAAGATGAAAATTTTATAACAACTAGACTTGTAGGAACACCAGGTTACCTTCCACCAGAGTCTCTAAAGGAGCTTCAAGTGACCCCAAAAACCGATGTGTTTGCGTTTGGAGTGGTGCTTTCAGAGATGTTAACAGGGAACCGAGCATTATTCCGAGAAAGCCAAGAAGAGATTAAAATGAAATCACTGATTAGTGTTGTTAATAAAGTATTCCAAGATGACGAGCTAGAGATTGCCTTAGAAGATGCCATAGATAAGAATCTGGAAGCAAGCTGTCGGAAGGAAGATGTCTACAAGGTGAATTCTTAA 846 0.3924 MRENDTPMEQQLGLVCVKVLGRGINVNVTEGRSTSILFFLLLYGTGLPEIEEATSNFDESRRIGSGGYGSVYFGVLGNKEVASKKMRSNKSKEFYAELKVELLGYANGEGDLYLMYEYVPNGSLNDHLHNPLLKGLEYIHDYTKARCVHRDIKSSNILLNDKFRAKVGDFGLAKLVDKTEDENFITTRLVGTPGYLPPESLKELQVTPKTDVFAFGVVLSEMLTGNRALFRESQEEIKMKSLISVVNKVFQDDELEIALEDAIDKNLEASCRKEDVYKVNS* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0781 281 SUPERFAMILY Protein kinase-like (PK-like) 37 246 IPR011009 -
Vra8g0781 281 ProSiteProfiles Protein kinase domain profile. 57 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra8g0781 281 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 47 279 IPR044812 GO:0019199|GO:0045087
Vra8g0781 281 Pfam Protein kinase domain 58 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra8g0781 281 PANTHER LYSM-DOMAIN PROTEIN KINASE FAMILY PROTEIN-RELATED 47 279 - -
Vra8g0781 281 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
Vra8g0781 281 SMART serkin_6 57 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra8g0781 281 Gene3D Phosphorylase Kinase; domain 1 42 118 - -
Vra8g0781 281 Gene3D Transferase(Phosphotransferase) domain 1 119 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0781 Vra-Chr8 15353281 15355652 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0781 49 267 Receptor kinase-like Gene Family AT1G51940 42.913 1.55e-56 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vra8g0781 Pkinase 2.3e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0781 - - vra:106770283 551.206