Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0777 ATGATCATCTTCATAATCCATTACTTAAAGGTGGGAGATTTTGGACTTGCAAAGCTGGTAGACAGAACCGATGATGAAAATTTTATAACAACTAGACTTGTAGGAACACCAGGTTACCTTCCACCAGAGTCTCTAAAGGAGCTTCAAGTGACCCCAAAAACTGATGTGTTTGCGTTTGGAGTGGTGCTTTCAGAGATGTTAACAGGGAACCGAGCATTATTCCGAGAAAGCCAAGAAGAGATTAAAATGAAATCACTGATTAATGTTGTTAATAAAGTATTCCAAGATGATGAGCCAGAGATTGCCTTAGAAGATGCCATAGATAAGAATCTAGAAGCAAGCTGTCGGAAGGAAGATGTCTACAAGTGTCCAAGACAACCCAACGACAATGATTGTGGATATTATGTGTGTCAATATATGAAGAAAATTATTAAGGAGGAACAATTTCAACTGATTATTTTTCTAGTTGCAGATGCCAACATTATCATGAAAGTCAGATCATTGAAGTTAGGGAAAATTGGTGTTTACATGTAA 534 0.3708 MIIFIIHYLKVGDFGLAKLVDRTDDENFITTRLVGTPGYLPPESLKELQVTPKTDVFAFGVVLSEMLTGNRALFRESQEEIKMKSLINVVNKVFQDDEPEIALEDAIDKNLEASCRKEDVYKCPRQPNDNDCGYYVCQYMKKIIKEEQFQLIIFLVADANIIMKVRSLKLGKIGVYM* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0777 177 Pfam Ulp1 protease family, C-terminal catalytic domain 112 149 IPR003653 GO:0006508|GO:0008234
Vra8g0777 177 Pfam Protein kinase domain 8 109 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra8g0777 177 Gene3D Transferase(Phosphotransferase) domain 1 6 153 - -
Vra8g0777 177 SUPERFAMILY Protein kinase-like (PK-like) 8 88 IPR011009 -
Vra8g0777 177 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 10 123 IPR044812 GO:0019199|GO:0045087
Vra8g0777 177 SUPERFAMILY Cysteine proteinases 115 148 IPR038765 -
Vra8g0777 177 ProSiteProfiles Protein kinase domain profile. 1 177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra8g0777 177 PANTHER LYSM-DOMAIN PROTEIN KINASE FAMILY PROTEIN-RELATED 10 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0777 Vra-Chr8 15245963 15247309 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0777 10 120 Receptor kinase-like Gene Family AT5G02070 39.130 1.97e-16 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Vra8g0777 Pkinase 8.6e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0777 - - vra:111242391 354.755