Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0747 ATGCAGGACGCAACAATGGTGGTGCCTCCATGGTTCGAGCCACTCCTCACCACATCGTTTTTCAATGTGTGTCGCGTTCATGGAGATGCTGCGAGAAGCGAATGTAACATGTTTTGTTTGGATTGTAATAACGAGGATGCGTTTTGCTTCTATTGCCGATCCTCGCGACACAAAGATCACCGAGTGATTCAGATAAGGCGATCTTCGTATCACGATGTGGTGAGGGTGTCGGAAATTCAGAAGGTGTTGGACATCAGTGGAGTGCAAACGTATGTGATTAACAGTGCCAGAGTTTTGTTTCTGAACGAGAGGCCTCAACCCAAGTCAGGGAAAGGCGTTGCTCACATTTGTGAGATTTGTGGAAGAAGCCTCTTGGACCCATTTCGGTTCTGTTCTTTGGGGTGTAAGCTTGTGGGAATAAAGAGAAATGGGGAAGCAATGTTTGGTGGTTTGGATTCTAAAAACGAGACACCAACAATGGAGGGCATGTCAAGGAGATTGGTTTCTTCAAGGCATCAACAAGAAGAAGAATTGCGTGAAGGCTCACAACAAGACATGTACCCGGCCACGCCTTCTCCACCTGCTTCAAACGCAAGGCGAAGAAAAGGCATTCCTCACAGGGCACCTTTTGCCTCCTAA 639 0.4742 MQDATMVVPPWFEPLLTTSFFNVCRVHGDAARSECNMFCLDCNNEDAFCFYCRSSRHKDHRVIQIRRSSYHDVVRVSEIQKVLDISGVQTYVINSARVLFLNERPQPKSGKGVAHICEICGRSLLDPFRFCSLGCKLVGIKRNGEAMFGGLDSKNETPTMEGMSRRLVSSRHQQEEELREGSQQDMYPATPSPPASNARRRKGIPHRAPFAS* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0747 212 SUPERFAMILY B-box zinc-binding domain 22 67 - -
Vra8g0747 212 MobiDBLite consensus disorder prediction 168 182 - -
Vra8g0747 212 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 211 - -
Vra8g0747 212 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 211 - -
Vra8g0747 212 MobiDBLite consensus disorder prediction 151 212 - -
Vra8g0747 212 Pfam PLATZ transcription factor 66 137 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0747 Vra-Chr8 14003677 14005723 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vra8g0747 PLATZ 1e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0747 - - gmx:100809455 390.193