Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0740 ATGGAACTCTCTCTGTTCCACCATCAGCACCATCCTATGATGTTCCTCAATTGCCCCATTAGCTTAACAAGAACACACACAAGACTTAACAAGAAAAATTCATACAGGTTATCATGCCACTGTTCATGTTCTTCCACAAAAAACACTACAGCAGAACCAGTTACAGTTTCTTCTTTGAGTATTGAAGGAAGGAGAGCATTCCTCAGTTGTCTCCTCACAACTTTTTGTGGAGTCTATGCATGTGATGTGGCTGGAGCTGTTAGCACAAGTAGAAGAGCTCTAAGAGGAGCAAAAATTCCTGAAAGTGATTATACAACCTTGCCCAATGGCTTGAAGTACTATGATTTGAAGGTCGGGAATGGAGCCGAAGCTAAAAAGGGATCTCGTGTTGCAATTCACTATGTGGCGAAATGGAAGGGTATCACCTTTATGACTAGTAGACAAGGAATGGGTGTTGGAGGAGGAACGCCCTATGGATTTGATGTAGGGCAATCAGAGAGAGGAACAGTCCTTAAAGGGTTGGATTTAGGTGTAGAGGGCATGCGAGTAGGAGGCCAGCGACTACTGATTGTTCCTCCTGAACTTGCCTATGGAAGCAAGGGAGTGCAAGAAATCCCTCCTAACTCAACGATTGAGTTGGACATTGAACTGCTTTCTATCAAACAAAGTCCATTTGGGACTCCTGTAAAGATAGTTGAAGGTTAA 705 0.434 MELSLFHHQHHPMMFLNCPISLTRTHTRLNKKNSYRLSCHCSCSSTKNTTAEPVTVSSLSIEGRRAFLSCLLTTFCGVYACDVAGAVSTSRRALRGAKIPESDYTTLPNGLKYYDLKVGNGAEAKKGSRVAIHYVAKWKGITFMTSRQGMGVGGGTPYGFDVGQSERGTVLKGLDLGVEGMRVGGQRLLIVPPELAYGSKGVQEIPPNSTIELDIELLSIKQSPFGTPVKIVEG* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0740 234 SUPERFAMILY FKBP-like 99 221 - -
Vra8g0740 234 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 8 234 - -
Vra8g0740 234 Gene3D - 87 225 IPR046357 GO:0003755
Vra8g0740 234 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP16-4, CHLOROPLASTIC 8 234 - -
Vra8g0740 234 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 123 218 IPR001179 GO:0003755
Vra8g0740 234 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 127 221 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0740 Vra-Chr8 13900309 13902798 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0740 116 220 Calmodulin-binding Proteins AT5G48570 32.727 7.03e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0740 - - vun:114191590 452.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g0740 8 13900309 13902798 Vra8g0740 8 13900309 13902798 ECH