Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0737 ATGATTGTGGTTGGTGAAAGCAATGAGGAATTTAATACCGTAGATGATAGTTGTTTGGAGTTGGTTCCTACTTTGAACATGTGTTTTGACACTATGCAAGAAGCAAAGAAATTTTATTCTGACTATGGAAAAAGATGTGGTTTTGGTGTTGGAACAATAACTTCTAAAAAGGACGACAATAACGAAGTGTACTACTTGAGATTGGTATGTTCAAGGGAAGGTAAATATGTTTCTAACATTCGTCCAGAAGTGAAAACTCTGCCTAGTCAGACTAATCAATGCCGTGCTGGAATAACAATTGCTCGAAAAGATGACAAATGGGTTGTAAGGACTGTAGCTGTAGAGCACAGTCATGAGCTTTGTTCACAAACCTCCAATCTATTCCGTGCCAATAGAAAATTGAACATGCATGCGAAGCACACATTGGAAGTTAATGATGAAGCCGGTGTACATATTAACAAGAGTTTCCTTAGCATGGTTGGTGAAGCTGGTGGATATGAAAATATGCAATTTATGGAGAGAGATGCTAGGAACTTCATTGGTCAACATAGAAGTACGACACTTCTACAATTTGTGGTTCAGTACGATAATGTTCTTAAATTCAAAGCCCAAAAAGAAATAGAAGCCGACTTCTATTCCTTCAATACCACAGTTGCATGTGGGTCTCAATCACCTATTGAAAGACAATTTCAAGTTGAGTACACACATGCAAAATTTGAGGAAGTACAAATTAAGTTTCAGTCCAGGATGAATTGTTTCTTCAAAGACACAGTGAAGGACTGTATTTCTAACAAGTACACCATCGAAGAAGAGTGCATGTGGGATGGAAAATCTACCGCCAAATATTACCATGTTGAATTTGATCCTCTTACAAATGATACAAGTTGCTCTTGCCTACTCTTTGAGTTTAGAGGTATTATTTGTCGGCATTGCCTATTCGTTCTCGGTCAGGAAGATTTACAAAATGTCCCCTCTAAATATGTTCTCCACCGTTGCAGCAAAAATATCCGAAGAAAGCACACACTGATTAGAGCAGCTTACAGTTCTTTGAATCAAGAACCCAAGATGCAAAGATACCAATCATTGTGTAAGTGGTTCTATGAAATAGCTGAGGCTGCATGTGAATCTGAATTTGCATCTCATAATTGGAAAAAGAATTGA 1161 0.3773 MIVVGESNEEFNTVDDSCLELVPTLNMCFDTMQEAKKFYSDYGKRCGFGVGTITSKKDDNNEVYYLRLVCSREGKYVSNIRPEVKTLPSQTNQCRAGITIARKDDKWVVRTVAVEHSHELCSQTSNLFRANRKLNMHAKHTLEVNDEAGVHINKSFLSMVGEAGGYENMQFMERDARNFIGQHRSTTLLQFVVQYDNVLKFKAQKEIEADFYSFNTTVACGSQSPIERQFQVEYTHAKFEEVQIKFQSRMNCFFKDTVKDCISNKYTIEEECMWDGKSTAKYYHVEFDPLTNDTSCSCLLFEFRGIICRHCLFVLGQEDLQNVPSKYVLHRCSKNIRRKHTLIRAAYSSLNQEPKMQRYQSLCKWFYEIAEAACESEFASHNWKKN* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0737 386 Pfam FAR1 DNA-binding domain 37 121 IPR004330 -
Vra8g0737 386 SMART 26again6 294 321 IPR006564 GO:0008270
Vra8g0737 386 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 20 133 IPR031052 GO:0006355
Vra8g0737 386 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 184 357 IPR031052 GO:0006355
Vra8g0737 386 PANTHER OS03G0843700 PROTEIN 20 133 - -
Vra8g0737 386 PANTHER OS03G0843700 PROTEIN 184 357 - -
Vra8g0737 386 Pfam SWIM zinc finger 283 315 IPR007527 GO:0008270
Vra8g0737 386 ProSiteProfiles Zinc finger SWIM-type profile. 283 319 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0737 Vra-Chr8 13744970 13746862 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vra8g0737 FAR1 2.9e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0737 - - vra:106770263 801.586