Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0727 ATGGAACCCAATGGGCTAGGCGCGGGAATGTTCTCTGGGTTGGTGGGAGTGGAGAACTCTTTGCCTCCGCAGCAACAGCAAAACCCTCACCATTTGCATAATCACTCCCAGATGGTTCCCTATGGCTCACACCACGACACTGATCCACATCATCAGCATCATAATCAATCGATCAAACAAGCGTACCCTCAATATTCTTCGATCAAGACCAAACAACAGCAACAAAGTGCCCTCAGTGACGATGATGATGACACCTCGGACCCCAAGAAGAAGGTGTCGATGTGGCAGAGAATGAAGTGGACTGACACTATGGTGAGGCTTTTGATAATGGCGGTTTATTACATTGGTGATGAGGGTGGCTCGGAAGGGACTGATAAGAAGAAGTCCTCGGGTATGCTGCAGAAGAAAGGGAAGTGGAAGTCGGTGTCGAGGGCTATGATGGAGAAAGGGTTCTATGTTTCTCCTCAACAGTGTGAGGATAAGTTCAATGACTTGAACAAGAGGTATAAGAGGGTGAATGATATTCTCGGGAAGGGAACTGCTTGCAGGGTTGTGGAGAATCAGAGTTTGTTGGAGACGATGGAGTTGTCACCAAAGATGAAAGAGGAGGTTAAGAAGTTGCTCAATTCCAAACATTTGTTCTTCAGGGAAATGTGTGCTTACCATAATAGTTGTGGTCATGTGAATAACAATACTCCACAGCAAGGAGAGACCGGGGGTGAGGTGTCTCAGTCTCAGGCTCAGGCTCAGGCTCAAGTACAGCCTCAGCAGCAACAACAACAACAGCCTCAGCAGCAGCAACAACAGCAACATTGTTTTCATTCATCAGAGGTGGGGAATTTGGGGGGTTTGAGGATGTTGAAAATGGGAAATGGGGAAGAGAATGAAGATGATTCGGATGAGGATGATGAGTCTGAGGATGATTCGGATGAGGAGGAAGATGATTCAGGAGAAGGTGGTTCAAGGGGTCATGTGGGGCATGGACATGAAGATATGGAGGATGATAATGATGGAAGGTCGATGAGGAAGAAGGCAAGGAAAGTGAGGGGAGTTGGTGTGTCAGCAGTTATGATGCAGCAACTGAATGCTGAGGTGAATGGTGTGTTCCAAGATGGGGGTAGGAGTGCTTGGGAGAAGAAGCAATGGATGAGAAACAGGATACTGCAGTTGGAGGAGCAGCAATTGAACTATCAGAGTCAATCATATGAGTTGGAGAAACAAAGGTTGAAATGGGCAAGGTTTAGCAGCAAGAAGGAGAGGGAAATGGAGAGAGCCAAACTTGAAAATGAACGAAGGAGACTTGAGAATGAGAGAATGGTTTTGCTCATTCGACACAAGGAGCTTGAGCTTATGAGTCTTCAACAGCAACAACAACATTCTTCTACTTAG 1389 0.4658 MEPNGLGAGMFSGLVGVENSLPPQQQQNPHHLHNHSQMVPYGSHHDTDPHHQHHNQSIKQAYPQYSSIKTKQQQQSALSDDDDDTSDPKKKVSMWQRMKWTDTMVRLLIMAVYYIGDEGGSEGTDKKKSSGMLQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGTACRVVENQSLLETMELSPKMKEEVKKLLNSKHLFFREMCAYHNSCGHVNNNTPQQGETGGEVSQSQAQAQAQVQPQQQQQQQPQQQQQQQHCFHSSEVGNLGGLRMLKMGNGEENEDDSDEDDESEDDSDEEEDDSGEGGSRGHVGHGHEDMEDDNDGRSMRKKARKVRGVGVSAVMMQQLNAEVNGVFQDGGRSAWEKKQWMRNRILQLEEQQLNYQSQSYELEKQRLKWARFSSKKEREMERAKLENERRRLENERMVLLIRHKELELMSLQQQQQHSST* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0727 462 MobiDBLite consensus disorder prediction 76 92 - -
Vra8g0727 462 MobiDBLite consensus disorder prediction 230 276 - -
Vra8g0727 462 MobiDBLite consensus disorder prediction 317 342 - -
Vra8g0727 462 MobiDBLite consensus disorder prediction 1 92 - -
Vra8g0727 462 Gene3D - 100 171 - -
Vra8g0727 462 MobiDBLite consensus disorder prediction 56 75 - -
Vra8g0727 462 Coils Coil 415 451 - -
Vra8g0727 462 MobiDBLite consensus disorder prediction 18 34 - -
Vra8g0727 462 MobiDBLite consensus disorder prediction 230 346 - -
Vra8g0727 462 PANTHER F16F4.11 PROTEIN-RELATED 1 462 - -
Vra8g0727 462 MobiDBLite consensus disorder prediction 294 316 - -
Vra8g0727 462 Pfam Myb/SANT-like DNA-binding domain 97 220 IPR044822 -
Vra8g0727 462 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 1 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0727 Vra-Chr8 13503572 13505531 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vra8g0727 Myb_DNA-bind_4 3.9e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0727 - - gmx:100816661 609.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g0727 8 13503572 13505531 Vra8g0727 8 13503572 13505531 ECH