Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0722 ATGGCTTCTTGCATGTGGCTCAAGAGTGCCTGTGGTGGTGGAAGTGGGAAGAAGCCGGCGCCGCGGGACGTGCCGCCGGGGCACTTGGCGGTGATGGTGGGAGAAGAGGCAAAGAGAAGGTTTGTGATAAGGGCTGATTACCTTAACCATCCCTTGCTTCAAAAACTTTTAGACCAATATGAAGGTTGTGGGTTCAACAAAAGTGGCCCTCTTGCTATACCTTGTGATGAGTACCTTTTCCAAGATATCATCCAGGCCCTTCGAGATGGATCATCCTCTCCTCATGGGCCCCTCAAGAAGCTCCATTTCAAGGACTCCGTGCCCTTACTTCAGGACAATGATGGCAAAGGGAGCACCAACAACTAA 366 0.5137 MASCMWLKSACGGGSGKKPAPRDVPPGHLAVMVGEEAKRRFVIRADYLNHPLLQKLLDQYEGCGFNKSGPLAIPCDEYLFQDIIQALRDGSSSPHGPLKKLHFKDSVPLLQDNDGKGSTNN* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0722 121 MobiDBLite consensus disorder prediction 91 121 - -
Vra8g0722 121 Pfam Auxin responsive protein 18 87 IPR003676 GO:0009733
Vra8g0722 121 PANTHER AUXIN RESPONSIVE SAUR PROTEIN 4 112 - -
Vra8g0722 121 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 4 112 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0722 Vra-Chr8 13398658 13399023 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0722 6 96 Calmodulin-binding Proteins AT4G34750 53.763 6.34e-24 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0722 K14488 - gmx:100777611 169.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g0722 8 13398658 13399023 Vra8g0722 8 13398658 13399023 ECH