Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0686 ATGATGAACTCACACAACCAACAGCTTTCCCTCTTATCTCTTTCTCTAGCACTTCTACTTCTCTCAGGTTTGAGAGTTGAGGGTAGGTTGAAACATCATGCGACGAATTACCAAAAATTGTTTGTTTTTGGCGACTCCTATGTGGATACCGGAAACACCAGAATAGATCAACCTGGGTCCTGGAAAAACCCTTACGGCATAACTTTCCCCGGAAAACCTGCCGGAAGATTCTCGGACGGTAGAGTTCTAACAGACTACATTGCTAAGTTTTTGGGACTGAAATCGCCTCTTCCCTACAAATTTAGGAAATTGATTCCACAAAATTTGAAATACGGGATGAACTTTGCATATGGTGGTACTGGTGTGTTTGATACATCCTCCAAAAACCCAAACATGACAATCCAAATCGATTTCTTCAAGCAGTTGATCAAAGAGAATGTTTACACAGCTTCAGACCTCAGCAAATCTGTTGCACTTGTCTCTGTCGCAGGAAATGATTACAATTTCTACTTGGCAACAAATGGCTCTATTCAGGGTTTTCCCTCTTTCATCGCCTCGGTGATTAATCAAACTGCAACCAACTTGCTTCGCATCCATAGTCTGGGAGTGAAGAAAATTGTTGTGGATGGTCTACAACCACTTGGATGTCTTCCTCAAAGCACAGCCTCTTTATCATTCCAAAAATGTAACAGTACTTTCAATGACCTCGTACTGCTCCACAACAACTTATTGAACCAAGCTGTGACTAAGTTGAATCAACAAACCAAGAACAAAACATCATTCATCGTTCTTGATCTTTACGACAGTTTCTTGTCGGTGCTGAACCACCCATCTAGCAATAACATTAAGGACGCATTCAAGCCTTGTTGCGTTGGTATAAGTAGCCAATATTCATGTGGAAGTGTGGATGAAAACAATGTTAAGAAATATAAGGTCTGTGATCATCCCGAATCAGCGTTCTTTTGGGACCTTTTGCATCCCACTCAAGCTGGTTGGCATGCCGTGTACAACGAGTTGCAAACCACAAAGGCTCTTCAACAAATCCGATACTGA 1053 0.4169 MMNSHNQQLSLLSLSLALLLLSGLRVEGRLKHHATNYQKLFVFGDSYVDTGNTRIDQPGSWKNPYGITFPGKPAGRFSDGRVLTDYIAKFLGLKSPLPYKFRKLIPQNLKYGMNFAYGGTGVFDTSSKNPNMTIQIDFFKQLIKENVYTASDLSKSVALVSVAGNDYNFYLATNGSIQGFPSFIASVINQTATNLLRIHSLGVKKIVVDGLQPLGCLPQSTASLSFQKCNSTFNDLVLLHNNLLNQAVTKLNQQTKNKTSFIVLDLYDSFLSVLNHPSSNNIKDAFKPCCVGISSQYSCGSVDENNVKKYKVCDHPESAFFWDLLHPTQAGWHAVYNELQTTKALQQIRY* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0686 350 Pfam GDSL-like Lipase/Acylhydrolase 40 338 IPR001087 GO:0016788
Vra8g0686 350 Gene3D SGNH hydrolase 27 347 IPR036514 -
Vra8g0686 350 PANTHER OSJNBB0059K02.9 PROTEIN 1 350 - -
Vra8g0686 350 SUPERFAMILY SGNH hydrolase 38 339 - -
Vra8g0686 350 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0686 Vra-Chr8 12104108 12116185 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0686 35 335 Pollen Coat Proteome AT1G75930 28.571 1.57e-33 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0686 - - gmx:100800932 535.413