Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0669 ATGGAACTCCAACCCTCATTGCAGTTCTTCACCAACAACGTCTATTTCTCTTATCTTCTCCTCTCACTCACCATCCTACTTCTTGTCATCGTAATCGCGCGTCTTTCTCACGGAAAGAACATCCTCTGCAGCTGCGAAACATGCCAGGCCTACCTCACTTCAAGCTGGTCCCAATACTTCCACAACCTCTGCGACTGGTACACCCACCTCCTCCGAACCTCCCCCACCAAAACCATCCACATCCACGTGCTGCGCAACACCATCACCGCCAACGTGGAAAACGTTGAGTACATTCTCAATACCAGGTTCCACAACTTTCCCAAGGGGAAACCCTTCTCTACCATCCTCGGTGACTTCCTCGGCAAAGGAATCTTCAACGTCGATGGCGACACCTGGCGCTTCCAGAAGAAGATGGCCGCCCTCCAACTCAACAACAACGGCGTAACCTTCTTCGCCTTCGAAATCATCAAGAGCGAAATCCATGACAGACTCCTCCCGCTCCTTCACGCGTCGACCCGAAACGGCGCCGTCTTGGACCTTCAGGACGTGTTCCGGAGATTCTCCTTCGATAGCATTTGCCGTTTCTCCTTCGGGCTGGACCCCAAGTGTTTGGAGAAGTCTTTGCCGATGTCAGAGTTCGCGGTTTGCTTTGACTTGGCGTCGAAGCTCTCTGCGGAAAGAGCCATGGCGTTGTCGCCTTATGTGTGGAAGGTGAAGAGGTTTTTCAACGTGGGGAGCGAGAAACGGCTACGGGAAGCGGTTGAAGTGATTAACAGGTTGGCCAGAGAGGTCATAAAGCAAAGGCGCGAAATGGGTTTCTCTGAAAACAAGGACTTGTTGTCGCGGTTCATGAGCACGGTCCACGACGATGACACGTATTTACGAGACATTGTTGTGAGCTTCTTATTGGCGGGTCGCGACACAGTGGCTTCGGCTCTCACCAGCTTCTTTTATCTGTTGGGGAAACATCCAGAAGTTGAATCGGAGATTCGTGCGGAGGCAGATCGAGTGGTTGGGCCTCATGAGGATCTCACGAGCTTTAAAGAGATTAAGCAATTGCACTATTTGCAAGCGGCGATGCATGAAAGTCTGAGGCTGTTTCCACCGATTCAGTTTGATTCAAAGTTTTGTTTGGAGGATGATGTGTTACCCGATGGGACGAAAGTGGAGAGTGGAACTAGGGTTACTTACCATCCCTATGCGATGGGAAGGTTGGAGGAAATATGGGGCTGTGATTGTTCGGAGTTTAGGCCAGAAAGATGGTTGAAGGATGGTGTGTTCCAACCCGAAAGTCCGTTCAAGTACCCGGTTTTTCAAGCAGGGTTGAGGGTTTGTTTGGGGAAGGAAATGGCTCTGATGGAGTTCAAAACTGTGGCACTTTCACTGCTTCGGAAGTTCCACATCGAGTTGGTGGAATCATCTTGTGGAAACCCTCGTTTCTCCCCTGGACTCACTGCCACCTTTAGGTTTGGCCTTCCCGTGAAGGTTCGTGAGAGAGGATTAGAACAACAACAACAACAACTGAACCCTCTCATTCACCTATCCTCTTCCTAG 1554 0.5064 MELQPSLQFFTNNVYFSYLLLSLTILLLVIVIARLSHGKNILCSCETCQAYLTSSWSQYFHNLCDWYTHLLRTSPTKTIHIHVLRNTITANVENVEYILNTRFHNFPKGKPFSTILGDFLGKGIFNVDGDTWRFQKKMAALQLNNNGVTFFAFEIIKSEIHDRLLPLLHASTRNGAVLDLQDVFRRFSFDSICRFSFGLDPKCLEKSLPMSEFAVCFDLASKLSAERAMALSPYVWKVKRFFNVGSEKRLREAVEVINRLAREVIKQRREMGFSENKDLLSRFMSTVHDDDTYLRDIVVSFLLAGRDTVASALTSFFYLLGKHPEVESEIRAEADRVVGPHEDLTSFKEIKQLHYLQAAMHESLRLFPPIQFDSKFCLEDDVLPDGTKVESGTRVTYHPYAMGRLEEIWGCDCSEFRPERWLKDGVFQPESPFKYPVFQAGLRVCLGKEMALMEFKTVALSLLRKFHIELVESSCGNPRFSPGLTATFRFGLPVKVRERGLEQQQQQLNPLIHLSSS* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0669 517 Coils Coil 250 270 - -
Vra8g0669 517 Gene3D Cytochrome P450 48 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g0669 517 Pfam Cytochrome P450 86 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g0669 517 PANTHER CYTOCHROME P450 23 493 - -
Vra8g0669 517 PANTHER CYTOCHROME P450 FAMILY PROTEIN, EXPRESSED 23 493 - -
Vra8g0669 517 SUPERFAMILY Cytochrome P450 56 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g0669 517 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g0669 517 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g0669 517 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g0669 517 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g0669 517 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g0669 517 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g0669 517 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g0669 517 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g0669 517 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0669 Vra-Chr8 11643181 11645139 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0669 43 499 Cytochrome P450 AT2G27690 61.555 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0669 K20624 - gmx:100784058 763.837