Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0664 ATGACAGCAGAAATGCTTACAGGTGTTCTTGTTTCTACTTTCCTCGAGAGGACTATCGACACTTTGGCTTCCCGTCTTGTCCACATATTACGTCAAAGAAAGCACAAGAAGCAACTCAACAACTTGAAGATGAAGTTCCTTGCCATTGATGTTGTGGCTCTTGATGCAGAACAAAAGCAATTCAAAGATCTACGCGTCAGAGATTGGCTTCTCAGGGCCAAAGATGTTGTGTTTGATGCAGAGGATCTTTTGGATGANATAGATTATGAACTCTCCAAAAGTCAGCCGGAAGTTGAGTCTCAGAGTGCTACTAACAAGGTGTGGAATTCCCTCAATTCTTCTTTTGTCAGTTTCTTCGAAATAGAAATTGAATCCAGGATGGAACAAGTCATTGAGGACCTAGAAGATCTTGCAAACGAAAGTTATATTCTAGGTTTGGAAAAGGGTGGTGGTGTTGGGATTGGATCAGTATCGGGTAGTAAATTAACATATACATCTTTGCCAAATGAAAGTGTTATCTATGGAAGAGATGATGACAAAGAATTTCTCTTTAACTGGCTCACATCGGACACTCCCAGCAACCTATCTATACTTTCTATTGTGGGCATGGGTGGGATGGGTAAGACCTCTCTTGCCCAACATGTATTCAATGACCCAAGGCTTGAAGGTAAATTTGATACTAAAGTTTGGGTCAGTGTTCCACAGGAATTTGATGTTCTCAAAGTATCCAGAGCAATTATTGACACAATAACTGCTTCAACTGATCATAGTATACAGCAGGAAGTAATTCAGAAAAAATTGAAAGAAGAACTTATGGGCAAGAAATTTCTTCTAGTTTTGGATGATGTTTGGAACGAAAGACCATCTAAATGGGAAGATGTGCAGAAGCCCTTAGTTTTCGGAGGCCAAGGCAGTAGAATTCTTGTCACTACTCGGAGTGAGAAGGTTGCTGTTACCATGCGATCAGAAAAGCACCTCCTGCAGATATTAAAAGAAGATCATTGTTGGGATTTGTTCGTAAAGCATGCATTCAAAAATGTTGATCCGCAACCAGACCCAGACTTCATAGAGATTGGTAAGAATATAGTGCAAAAATGTAATGGGCTTCCTTTAGCCTTAAAAACTATGGGAAGTCTATTACACAATAAGTCATTCCTTTGGGAATGGGAAAGTATTATGAAAAGTGAGATATGGCATTTTTCAGAAAATGAGAGTGATATACTCCCTGCTTTAAGACTGAGCTATTTTCACCTTCCTTCTCATTTGAAGAAATGTTTTGCTTTTTGTGCCTTATTTCCCAGAGGTTATCGGTTTGACAAAGAGTGTTTAATTCAATTGTGGATGGCTCAAAATTTTCTAGAAAACCCTCTACAGAAAAAGAGTCCTAAAGAAGTTGGTGAAGAATATTTCAATGATCTATTATCTTACTCCTTCTTTCAACAATCAAGCAACGAAGAGGAAAAGCGTTTTATCATGCATGATCTTCTAAACGATTTGGCAAAATACATTTGTGAGGACATCTGCATCAGGTTAGGAGTTGATGAACCAAAAGGTATACCCAAAACAATCCGTCATTGTTCATTTTCATCCTCTAAATTATGTTTTGATGGGTTTGGGAGTTCGATTGATCCTCAAAAGTTGCATACATTTACGCCAACAGATCGGGGTTGGCATTGGAATTGCAAGATGTCGGTAGATGACTTGTTCTCCAGATTTAAGTTGATACGGGTTTTGTCTTTGTGTCATTGTCGTAGCCTTGTGGAGGTGCCTAAATCTGTAGGAAATCTTAAGCATCTTCGTTCATTAGATCTATCCTGGACTCAAATAAAAAATCTACCTGAATCAATAAGTTCACTCTTCAAATTGCAAACACTGAAGCTAAACAATTGTCGAAAATTAAAGGAGCTTCCCTCATGTTTACATCAACTCGATAATTTGCGTTGTCTTGAATTAGTAGGTATTGGAGTGAAAAATGTGGTAACACATTTGGGAAAGCTGAAGAATCCTCAAGTATCCATAAGTTCATTTCATGTTGAGAAAAGTAAAAAAATCAATATTCAGCAATTAGGAAAACTCAATCTTCATGGAAGTCTAACAATTGATGATCTGCAGAATATTGAGAATCCCTCTTATGCATTAGAAGTAGATTTGAAGAACAAACTACATCTTGTGGAGCTACGGTTAACATGGAATTTCATTGGCAGCTCTTCCGTTGATTCAGAAAAAGTTGAGGATGTAATTGAGAATCTACAACCTTCAAAATACTTGAAGAAGTTGTCAGTAGGTAACTATATTGGTAAACAATTTCCAAATTGGTTACTCCATAATTCATTACCGAATCTGGTGTCCTTAGTGTTGGAGGAATGTGAATCTTGCCAACGTTTACCTCCGCTTGGACTTTTGCCATTTCTCAAGTACCTGCAGATTTCAGGGTTTGATGAGATAATGAGTATTGATGCTGATTTTCATGGGAACAACTCTTGTTCATTTAAATCCCTTCGAAAATTGTATTTCTCTAATATGAGGCAATGGGAAAAGTGGGACTGCCAAGCTGTGACAGGTGCTTTTCCACGTCTGGAATTTTTTTCCATAGGAAATTGTCCCAAGCTGAAAGGACACCTGCCAAAGTTTGCTGCTTTAAAATCCCTATATGTCTTTCACTGCGAACAACTTGAAGCTTTGATGGTCAGTGCGCTAGAATTACATCTACAAGATTGTGGAAAGCTGCAGTTGGAGCGATCTACAATGAAAAAGCTCACAATGGATGAAAGTATGCTATTCAGCATGGCAGCATCATTGGTGGCAACGGTTGAAAGTATGCTATTCGACACTTCTCTTGAAAACCTTTCCTTTTGTTCACTTCTAGAGTCAATAAGTGATGATTGTGTCTCTCTAAGGATCTTTCCACTGGATTTCTTCCCAACACTCAGGACCCTTGAACTCAGTGGATTTCCTAATCTACATATGATTTCACAGGATCACGTTCACAATCATCTCCAGCATCTCACAATCAAAGACTGTCCAAGACTTGAGTCGTATGGAGGATAA 3048 0.3845 MTAEMLTGVLVSTFLERTIDTLASRLVHILRQRKHKKQLNNLKMKFLAIDVVALDAEQKQFKDLRVRDWLLRAKDVVFDAEDLLDXIDYELSKSQPEVESQSATNKVWNSLNSSFVSFFEIEIESRMEQVIEDLEDLANESYILGLEKGGGVGIGSVSGSKLTYTSLPNESVIYGRDDDKEFLFNWLTSDTPSNLSILSIVGMGGMGKTSLAQHVFNDPRLEGKFDTKVWVSVPQEFDVLKVSRAIIDTITASTDHSIQQEVIQKKLKEELMGKKFLLVLDDVWNERPSKWEDVQKPLVFGGQGSRILVTTRSEKVAVTMRSEKHLLQILKEDHCWDLFVKHAFKNVDPQPDPDFIEIGKNIVQKCNGLPLALKTMGSLLHNKSFLWEWESIMKSEIWHFSENESDILPALRLSYFHLPSHLKKCFAFCALFPRGYRFDKECLIQLWMAQNFLENPLQKKSPKEVGEEYFNDLLSYSFFQQSSNEEEKRFIMHDLLNDLAKYICEDICIRLGVDEPKGIPKTIRHCSFSSSKLCFDGFGSSIDPQKLHTFTPTDRGWHWNCKMSVDDLFSRFKLIRVLSLCHCRSLVEVPKSVGNLKHLRSLDLSWTQIKNLPESISSLFKLQTLKLNNCRKLKELPSCLHQLDNLRCLELVGIGVKNVVTHLGKLKNPQVSISSFHVEKSKKINIQQLGKLNLHGSLTIDDLQNIENPSYALEVDLKNKLHLVELRLTWNFIGSSSVDSEKVEDVIENLQPSKYLKKLSVGNYIGKQFPNWLLHNSLPNLVSLVLEECESCQRLPPLGLLPFLKYLQISGFDEIMSIDADFHGNNSCSFKSLRKLYFSNMRQWEKWDCQAVTGAFPRLEFFSIGNCPKLKGHLPKFAALKSLYVFHCEQLEALMVSALELHLQDCGKLQLERSTMKKLTMDESMLFSMAASLVATVESMLFDTSLENLSFCSLLESISDDCVSLRIFPLDFFPTLRTLELSGFPNLHMISQDHVHNHLQHLTIKDCPRLESYGG* 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0664 1015 PRINTS Disease resistance protein signature 197 212 - -
Vra8g0664 1015 PRINTS Disease resistance protein signature 270 284 - -
Vra8g0664 1015 PRINTS Disease resistance protein signature 366 380 - -
Vra8g0664 1015 PRINTS Disease resistance protein signature 617 633 - -
Vra8g0664 1015 ProSiteProfiles Leucine-rich repeat profile. 598 619 IPR001611 GO:0005515
Vra8g0664 1015 PANTHER DISEASE RESISTANCE PROTEIN RP 20 1012 IPR044974 GO:0006952
Vra8g0664 1015 Pfam NB-ARC domain 177 394 IPR002182 GO:0043531
Vra8g0664 1015 Gene3D - 414 502 IPR036388 -
Vra8g0664 1015 PANTHER OS05G0414200 PROTEIN 20 1012 - -
Vra8g0664 1015 Gene3D - 11 138 - -
Vra8g0664 1015 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 429 IPR027417 -
Vra8g0664 1015 Coils Coil 120 140 - -
Vra8g0664 1015 SUPERFAMILY L domain-like 492 1012 - -
Vra8g0664 1015 Gene3D - 330 413 IPR042197 -
Vra8g0664 1015 Gene3D - 156 329 IPR027417 -
Vra8g0664 1015 Pfam Rx N-terminal domain 11 100 IPR041118 -
Vra8g0664 1015 Gene3D Ribonuclease Inhibitor 557 929 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0664 Vra-Chr8 11505232 11509280 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0664 187 897 WRKY Transcription Factor Family AT5G45050 23.709 1.38e-11 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0664 - - vra:106771961 2021.13