Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra8g0652 | ATGGCTGGAGATATTAAGGAGAGAACTTTGGCAATAGGGTATTCTTTTCTTTTACTGCTATTGACTTCACTTCTTTGTAGCACCGAGGGTTTGAACACTGAGGGGCAAATCTTGCTAGAGCTTAAGAATGGATTTCATGATAAATCTAATGTTTTGGAAAGTTGGAAGCCTACTGATGAAACCCCGTGTCGATGGAAAGGTGTAAATTGCAGTCATGGTAGTGATAACAATCGAGTAGTTACGTCGCTTAATTTGACTTCAATGGGTCTTTCTGGAACTCTAAATGCTGCTGGCATTGGGGGTCTGACCCATCTGACTTATCTCAATCTTGCCTACAATGGGTTGACTGGGAATATCCCGAAGGAGATTGGTGATTGCTTGAATTTGGAATATCTTTATTTGAATAATAATCAGTTTGAGGGCACAATTCCGGCTGAATTGGGTAAGCTGTCTGTTTTGAGAAGTTTGAATATTTACAACAACAAACTCTCTGGTGTGATTCCATATGAGTTTGGGAACTTGTCTTCGATGGTTGAGCTAGTGGCCTATAGCAACTTTCTTGAGGGACCCCTGCCTAATTCCATTGGAAATCTTAAGAATCTTGTAAATTTCAGAGCTGGGGCAAATAACATTACTGGTAACTTGCCAAAGGAAATTGGTGGATGTAAGAGCTTAATGCTTCTTGGTCTTGCACAAAATCAGATAGGAGGGGAGATACCAAGGGAGATTGGGATGCTTGCCAGCTTGAAAGAATTGGTTTTATGGGGAAACCAGCTTTCAGGACCTATTCCTAAAGAGATTGGGAATTGTAGCAGTCTTGAGAAAATTGCTATATATGGGAATTATCTTATTGGACCTTTGCCTAAGGAAATAGGGAACCTCAAATCTTTGAGGTGGTTGTATGTTTACAGAAACAAGTTGAATGGAACCATTCCCAGGGAAATTGGAAATCTTACTTCATGTTTAGACATTGATTTCTCAGAGAACTCTTTAGTAGGTAGTATCCCTTCAGAGTTTGGTAAAATAAATGGTCTAAGTTTGCTGTTTCTATTTGAGAACCATCTAACTGGTGTTATACCAAATGAGCTTAGTAGCTTGAAGAACCTGTCAAAGCTAGACCTGTCAATAAATAATCTCACAGGTCCAATTCCATTTGGCTTCCAATATTTGACTAAAATGAACCAGTTGCAACTTTTTGACAACTCCCTGAGTGGTATTATTCCCTCGGGACTTGGATTTCATAGTCCACTTTGGGTTGTTGACTTTTCTGACAACAACTTGACAGGAAGAATACCCCCTCATCTGTGCAGATATTCTCGTTTGATGTTGTTGAATCTTGCAGCTAATCATCTTGATGGAAATATACCAACAGGTATACTAAACTGTAAATCATTGGCACAGTTGTTGATACTTGGAAACATGGTTACTGGCAGCTTCCCTTTAGAATTGTGTAAGCTGGAGAACTTGACTGCCATTGATTTGAATGAAAACAGGTTCAGTGGTACACTCCCTTCTGATATTGGCAACTGCCACAGGTTGCAAAGGCTTCATATTGCCAACAATTACTTCACATTGGAGTTGCCTAAGGAAATAGGTAATCTCTCTCAGTTGGTTACCTTTAATGTTTCGTCAAATCTTTTCACTGGAACAATCCCACCTGAGATTTTTCAGTGTCAAAGACTACAAAGACTTGACCTCAGCCAGAATAACTTTTCTGGTTCCTTACCTGGTGAGATTGGAACACTTCAGCACTTGGAGATTCTTAAGCTTTCAGACAATAGGCTTTCTGGATATATTCCTGCAGCACTAGGCAATCTGTCTCATTTGAACTGGTTGTTGATGGATGGTAACTATTTTTTCGGCGAAATACCTCCTCAGTTAGGTTCTCTTTCAAGCTTGCAGATTGCAATGGATCTCAGTTACAATAACCTTTCTGGAAAAATACCAGTTCAGCTTGGCAGTCTCAACATGCTTGAATATCTCTATCTCAATAACAACAATTTGGATGGTGAAATTCCCAGCACATTTGAAGAGCTATCTAGCTTGTTGGGTTGCAATTTCTCATTCAATAACCTGTACGGACCTATTCCTTCCACTAAAATTTTCCAAAGTATGGCTGTGAGCAGCTATATTGGTGGTAAGAATGGCCTCTGTGGTGCACCTCTCGGTGACTGCAGGACCAATTCTGCCTCTCACTCTGATACTTCAGCGAAAAGTTTTGATTCTCGTCGCGCTAAAATAGTCATGATCATTGCTGCTTCTGTTGGTGGTATTTCACTCATTTTCATCTTAGTTATTTTATATTTTATGAGACGTCCTAGAGAGTCAATTGATACCTTTGGAGGCACTGAGGCTCCCTCCCCAGATTCAGATATCTATTTCCCTCGAAAGGAAGGTTTGACATTCCATGATCTAGTTGAAGCTACAAAAAGATTTCATGAAAGCTATGTTATTGGTAAGGGAGCATGTGGAACCGTGTACAAGGCAGTGATGAAATCTGGTGAGACCATTGCTGTTAAGAAGTTAGCATCAAACAGGGAAGGGAACAACATTGAGAATAGCTTCAGAGCTGAAATATCAACTCTGGGAAGAATAAGGCATCGGAACATAGTGAAATTGTATGGCTTTTGCTACCACCAGGGTTCCAATCTCCTGCTTTATGAGTACATGGAAAGAGGTAGCTTAGGTGAACTATTGCATGGTTCTGCAACTACTTTGGAATGGTCAACTCGGTTCATGATTGCACTTGGAGCTGCTGAGGGTCTTGCCTACTTGCATCATGACTGCAAACCAAAAATCATCCACCGCGATATAAAATCTAACAACATTCTCTTGGATGAAAATTTTGAGGCTCATGTTGGTGATTTTGGTTTGGCAAAAGTGATTGACATGCCCCAGTCAAAATCAATGTCTGCTGTTGCTGGATCTTATGGCTATATTGCTCCTGAATATGCATATACCATGAAGGTGACAGAAAAGTGTGACATATACAGTTATGGTGTTGTGCTTTTGGAATTGCTGACTGGAAGAACACCAGTTCAGCCACTAGATCAAGGAGGAGATCTTGTCTCATGGGTGAGAAACCATATCAGGGATCACGACAATTCGCTGACGCCAGAGATACTTGATACTCATGTTGATCTGGAAGACCAAACCACAGTGAATCACATGCTCACTGTTTTGAAGCTTGCTTTAGTATGCACAAGTGTGTCTCCTACAAAGAGGCCATCAATGAGGGAAGTTGTGAAGATGCTTATTGAGTCCAATGAGAGAGAAGGAAACTTAACACTCACTCAAACACACCTTGATCTTCCTTCCAAAGATGGCTTGTGA | 3333 | 0.4056 | MAGDIKERTLAIGYSFLLLLLTSLLCSTEGLNTEGQILLELKNGFHDKSNVLESWKPTDETPCRWKGVNCSHGSDNNRVVTSLNLTSMGLSGTLNAAGIGGLTHLTYLNLAYNGLTGNIPKEIGDCLNLEYLYLNNNQFEGTIPAELGKLSVLRSLNIYNNKLSGVIPYEFGNLSSMVELVAYSNFLEGPLPNSIGNLKNLVNFRAGANNITGNLPKEIGGCKSLMLLGLAQNQIGGEIPREIGMLASLKELVLWGNQLSGPIPKEIGNCSSLEKIAIYGNYLIGPLPKEIGNLKSLRWLYVYRNKLNGTIPREIGNLTSCLDIDFSENSLVGSIPSEFGKINGLSLLFLFENHLTGVIPNELSSLKNLSKLDLSINNLTGPIPFGFQYLTKMNQLQLFDNSLSGIIPSGLGFHSPLWVVDFSDNNLTGRIPPHLCRYSRLMLLNLAANHLDGNIPTGILNCKSLAQLLILGNMVTGSFPLELCKLENLTAIDLNENRFSGTLPSDIGNCHRLQRLHIANNYFTLELPKEIGNLSQLVTFNVSSNLFTGTIPPEIFQCQRLQRLDLSQNNFSGSLPGEIGTLQHLEILKLSDNRLSGYIPAALGNLSHLNWLLMDGNYFFGEIPPQLGSLSSLQIAMDLSYNNLSGKIPVQLGSLNMLEYLYLNNNNLDGEIPSTFEELSSLLGCNFSFNNLYGPIPSTKIFQSMAVSSYIGGKNGLCGAPLGDCRTNSASHSDTSAKSFDSRRAKIVMIIAASVGGISLIFILVILYFMRRPRESIDTFGGTEAPSPDSDIYFPRKEGLTFHDLVEATKRFHESYVIGKGACGTVYKAVMKSGETIAVKKLASNREGNNIENSFRAEISTLGRIRHRNIVKLYGFCYHQGSNLLLYEYMERGSLGELLHGSATTLEWSTRFMIALGAAEGLAYLHHDCKPKIIHRDIKSNNILLDENFEAHVGDFGLAKVIDMPQSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRTPVQPLDQGGDLVSWVRNHIRDHDNSLTPEILDTHVDLEDQTTVNHMLTVLKLALVCTSVSPTKRPSMREVVKMLIESNEREGNLTLTQTHLDLPSKDGL* | 1111 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra8g0652 | 1110 | SMART | LRR_typ_2 | 534 | 558 | IPR003591 | - | |
Vra8g0652 | 1110 | SMART | LRR_typ_2 | 486 | 510 | IPR003591 | - | |
Vra8g0652 | 1110 | SMART | LRR_typ_2 | 582 | 605 | IPR003591 | - | |
Vra8g0652 | 1110 | SMART | LRR_typ_2 | 655 | 678 | IPR003591 | - | |
Vra8g0652 | 1110 | SMART | LRR_typ_2 | 102 | 126 | IPR003591 | - | |
Vra8g0652 | 1110 | SMART | LRR_typ_2 | 150 | 173 | IPR003591 | - | |
Vra8g0652 | 1110 | SMART | LRR_typ_2 | 294 | 318 | IPR003591 | - | |
Vra8g0652 | 1110 | SMART | LRR_typ_2 | 366 | 389 | IPR003591 | - | |
Vra8g0652 | 1110 | SMART | LRR_typ_2 | 246 | 270 | IPR003591 | - | |
Vra8g0652 | 1110 | Pfam | Leucine rich repeat | 560 | 618 | IPR001611 | GO:0005515 | |
Vra8g0652 | 1110 | Gene3D | Ribonuclease Inhibitor | 30 | 184 | IPR032675 | - | |
Vra8g0652 | 1110 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED | 7 | 1096 | - | - | |
Vra8g0652 | 1110 | Pfam | Leucine rich repeat N-terminal domain | 32 | 71 | IPR013210 | - | |
Vra8g0652 | 1110 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED | 7 | 1096 | - | - | |
Vra8g0652 | 1110 | Gene3D | Ribonuclease Inhibitor | 283 | 387 | IPR032675 | - | |
Vra8g0652 | 1110 | SMART | serkin_6 | 812 | 1085 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vra8g0652 | 1110 | SUPERFAMILY | Protein kinase-like (PK-like) | 792 | 1085 | IPR011009 | - | |
Vra8g0652 | 1110 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 933 | 945 | IPR008271 | GO:0004672|GO:0006468 | |
Vra8g0652 | 1110 | Gene3D | Ribonuclease Inhibitor | 388 | 729 | IPR032675 | - | |
Vra8g0652 | 1110 | Pfam | Protein kinase domain | 813 | 1083 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vra8g0652 | 1110 | SUPERFAMILY | L domain-like | 388 | 703 | - | - | |
Vra8g0652 | 1110 | SUPERFAMILY | L domain-like | 52 | 404 | - | - | |
Vra8g0652 | 1110 | Gene3D | Phosphorylase Kinase; domain 1 | 788 | 889 | - | - | |
Vra8g0652 | 1110 | ProSiteProfiles | Protein kinase domain profile. | 812 | 1097 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vra8g0652 | 1110 | Gene3D | Ribonuclease Inhibitor | 185 | 282 | IPR032675 | - | |
Vra8g0652 | 1110 | Gene3D | Transferase(Phosphotransferase) domain 1 | 890 | 1102 | - | - | |
Vra8g0652 | 1110 | Pfam | Leucine Rich Repeat | 128 | 150 | IPR001611 | GO:0005515 | |
Vra8g0652 | 1110 | Pfam | Leucine Rich Repeat | 658 | 679 | IPR001611 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra8g0652 | Vra-Chr8 | 11025650 | 11030744 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra8g0652 | 51 | 1085 | Receptor kinase-like Gene Family | AT1G73080 | 37.743 | 0.0 | 651 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Vra8g0652 | Pkinase | 2.5e-52 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra8g0652 | - | - | gmx:100805792 | 1928.68 |