Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra8g0648 | ATGGGTTCATTCTCTGGCACTTGTGAAATTGTAGAAGCAAGGGATGACCTAAATACAGAGAAAGCTGGCGGGATATATCAGTCCAATTCTGGATATAGCTTGGATGAAAAAAACCAGAAGCATCCTGTGCTGAAACAGGGATATAAGGATAATCTAGATGATGATATTAATAAGCTGTTTGAATCAATTACTCTTAAATCTTCATCAAGGGATTCTGGCCTTTTACAGGATGGTACAAGCCCTAAGATGAAAAGTTCATTGAAAAAACCAATTACAGTGGGTGCTTCTCGGTCCCCACGAGTTGGATATTCTGAGCCTTTAACTTTGAAGCAGGCTTTAAGAGACCTATGTATATCTAAGGCATCAGAAATGGCTGCCATGAAAAGATTATCAAAGTCAACTGCCTCTCCAAGAATATCTGAGGTTGGGAAGATACAGACATTGTACAATTCAGTTGTAGTTGAAGGTAGACAATCTGGGCCTTCTAATGTTGAGAGTAAAGGGAGTACAAGCGAAATATCTCTAGTGCCGGAAGAGAGCAGCTCACATGCCTTGGATAAAGCTTCCCAGTCTCATCCAACTGTTAAAAGCACATCACTAAGCCAAAATGTTCAATCTTCCAAAATTTCTGTTGCAACTACTGAAAATGGTACTGGGGCTTCATTGATAGGTGACTTGGCTAGTTCATCAAATAAAGTTGGGGTTCTATCGCAGTCTTTGGAACCTTCTCAAATAGAAAAACAAACATATGCATCTTCTTCATCTAGTTGTAACACTAATGGAAGTAAGTTAGACTTGTCTGAAAATGCTTCTTCCTCTAATAAATTAGGAAATAAAGCATGTGTATCAAAGAATGGGCAGAAAGATAGGTTACAAACAGTCTGTTCCTCATCTACTTCAGTAAACGGCAGCAGAGTGTGCAAACTATCACGGCATGCCCCTCGTACGGTCAAATCAATTATCAAGAATAAAAGTTTGGGTAAGAAAAAACTAAAGCAGGATTCCTTTTCTGCTGTATTTGATCCTACATCCAATGAAGTAAATAGCCAGTCAGTTACTAGTGCAACTCAACTTGTTTGTGAGAGATGCTGGTGTGCTATAGAAAACAACAAAGGTATTGTATCATTGGACTCTACTAGTTCTGGAGATGGAATTAACTCTGTTAATGTGCACTCAGGCTCAGCACCAGCTGGCTGTAATAGTGCCAGAGAAGTTACAAAAGTGAAAAAGAATACCGTATTGAAAGAGCAACTTGAATTTTCACAAAGTTCGAAGAGTAGTCAAGGTGACTACAGTAGTAGTACAAGTACAAGTGATGAGAGTAATCTCAGTGGAGCTAGTTGTGGCAATAGGCCTCACATGTCAAAGGATGTTAGATGGGAGGCCATACGACATGCTCAAATGCAGCATGGAGTCTTGGGCTTGAGACACTTCAATCTTTTGAGGAAGTTAGGTTGTGGAGACATTGGAACTGTATATCTTGCTGAGCTAATTGGCAAAAGTTGTTTTTTTGCTATCAAGGTGATGGACAATGAATTTTTGTCAAGAAGGAAGAAGATGCCTAGGGCTCAAACTGAAAGAGAAATATTAAGGATACTGGATCATCCTTTTCTTCCGACACTGTATGGGCAGTTTACATCAGATAATTTATCATGTCTGGTCATGGAGTATTGTCCAGGTGGTGATCTTCATGTTCTACGGCAGAAACAGCTTGGTAGAAGTTTTTCAGAGCCAGCAGCTAGGTTTTATGTAGCTGAAGTCCTTCTTGCTTTAGAGTACTTGCACATGCTTGGAGTGGTTTACCGTGATTTGAAGCCAGAAAACATTCTTGTTCGAGAAGATGGTCACATTATGCTGACAGATTTTGATCTGTCACTTAAGTGTGATGTTAGCCCGACGCTTCTGAAGTCATCTGATGTGGATCCTGCTAAGAATTCTGGTCCTTGTGCACAATCTAATTGCATTGAGCCATTTTGTATTGAACCATCCTGTCAAGTTCCATGCTTCAGCCCCAGACTCCTACCTCCTGCCGCAAAAACAAGGAAATTAAAAACAGATCTTGCTGCCCATCTCAGATCATTGCCACAGCTCGTGGCTGAACCCACTGACGCAAGATCAAATTCATTTGTTGGTACACATGAATATTTGGCGCCTGAGATAATCAAAGGAGAGGGACACGGAGCTGCAGTTGACTGGTGGACATTTGGTGTTTTTCTATATGAGCTCTTATATGGCAGAACACCCTTTAAAGGTTGTAATAATGAAGAAACATTAGCCAACGTGGTGTTGCAAGGTCTCAGGTTCCCTGATACCCCATTCGTTAGTTTCCAAGCGAGGGATCTCATTAGGGGGTTGTTGGTTAAAGAGCCTGAAAATCGTTTGGGTACAGAGAAAGGGGCTGCTGAGATAAAACAGCACCCATTCTTTGAAGGCCTTAATTGGGCCTTAATTCGTTGTGCTATCCCACCAGAACTTCCAGACTCGTGTGAATTTGGAGTTTCAGAGATGACTCCACAGTCCCAGTGCAAGGGTATTCAGTATGTAGAGTGTAATGCAGCAGGGGAGCAAGTGGAATTTGAGTTGTTTTAA | 2589 | 0.4114 | MGSFSGTCEIVEARDDLNTEKAGGIYQSNSGYSLDEKNQKHPVLKQGYKDNLDDDINKLFESITLKSSSRDSGLLQDGTSPKMKSSLKKPITVGASRSPRVGYSEPLTLKQALRDLCISKASEMAAMKRLSKSTASPRISEVGKIQTLYNSVVVEGRQSGPSNVESKGSTSEISLVPEESSSHALDKASQSHPTVKSTSLSQNVQSSKISVATTENGTGASLIGDLASSSNKVGVLSQSLEPSQIEKQTYASSSSSCNTNGSKLDLSENASSSNKLGNKACVSKNGQKDRLQTVCSSSTSVNGSRVCKLSRHAPRTVKSIIKNKSLGKKKLKQDSFSAVFDPTSNEVNSQSVTSATQLVCERCWCAIENNKGIVSLDSTSSGDGINSVNVHSGSAPAGCNSAREVTKVKKNTVLKEQLEFSQSSKSSQGDYSSSTSTSDESNLSGASCGNRPHMSKDVRWEAIRHAQMQHGVLGLRHFNLLRKLGCGDIGTVYLAELIGKSCFFAIKVMDNEFLSRRKKMPRAQTEREILRILDHPFLPTLYGQFTSDNLSCLVMEYCPGGDLHVLRQKQLGRSFSEPAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLKCDVSPTLLKSSDVDPAKNSGPCAQSNCIEPFCIEPSCQVPCFSPRLLPPAAKTRKLKTDLAAHLRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGRTPFKGCNNEETLANVVLQGLRFPDTPFVSFQARDLIRGLLVKEPENRLGTEKGAAEIKQHPFFEGLNWALIRCAIPPELPDSCEFGVSEMTPQSQCKGIQYVECNAAGEQVEFELF* | 863 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra8g0648 | 862 | SUPERFAMILY | Protein kinase-like (PK-like) | 456 | 827 | IPR011009 | - | |
Vra8g0648 | 862 | MobiDBLite | consensus disorder prediction | 157 | 206 | - | - | |
Vra8g0648 | 862 | MobiDBLite | consensus disorder prediction | 247 | 273 | - | - | |
Vra8g0648 | 862 | Pfam | Protein kinase domain | 706 | 809 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vra8g0648 | 862 | Pfam | Protein kinase domain | 479 | 631 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vra8g0648 | 862 | Gene3D | Transferase(Phosphotransferase) domain 1 | 558 | 627 | - | - | |
Vra8g0648 | 862 | MobiDBLite | consensus disorder prediction | 419 | 449 | - | - | |
Vra8g0648 | 862 | ProSiteProfiles | Protein kinase domain profile. | 478 | 809 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vra8g0648 | 862 | SMART | serkin_6 | 478 | 809 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vra8g0648 | 862 | MobiDBLite | consensus disorder prediction | 70 | 86 | - | - | |
Vra8g0648 | 862 | PANTHER | FLIPPASE KINASE 1-RELATED | 1 | 862 | - | - | |
Vra8g0648 | 862 | Gene3D | Transferase(Phosphotransferase) domain 1 | 702 | 821 | - | - | |
Vra8g0648 | 862 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 599 | 611 | IPR008271 | GO:0004672|GO:0006468 | |
Vra8g0648 | 862 | CDD | STKc_phototropin_like | 476 | 827 | - | - | |
Vra8g0648 | 862 | Gene3D | Phosphorylase Kinase; domain 1 | 476 | 557 | - | - | |
Vra8g0648 | 862 | MobiDBLite | consensus disorder prediction | 419 | 450 | - | - | |
Vra8g0648 | 862 | PANTHER | PROTEIN KINASE SUPERFAMILY PROTEIN | 1 | 862 | - | - | |
Vra8g0648 | 862 | MobiDBLite | consensus disorder prediction | 70 | 89 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra8g0648 | Vra-Chr8 | 10917864 | 10924425 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra8g0648 | 1 | 862 | AGC Kinase Gene Family | AT2G36350 | 51.194 | 0.0 | 850 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | AGC_RSK-2 | Vra8g0648 | Pkinase | 9.8e-36 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra8g0648 | - | K08286 | gmx:100813470 | 1469.91 |