Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0646 ATGGAGAGTTGTTTCAGCTTTGCACAGTGGCAAGAGCTTGAGTTGCAGACTCTGATATTCAGGTACATGCTGGCCGGTGCTCCTGTTCCTCCTCAGCTGCTTCAACCAATCAAGAAAAGCTTCCTTCATTCCCCTCCCCCTTTCCTTCTTCAACTTTATCACCCTCCTTTGTTGGAATCAGGGTACTATTGGGGAAGAGAAGCAGTGGATCCGGAGCCAGGTCGGTGCAGGAGGACGGACGGGAAGAAGTGGCGGTGCTCGAGGGAGGCGGTGGAGGGTCAGAAGTACTGCGAGCGGCACATGCATCGTGGCCGAAACCGTTCAAGAAAGCCTGTGGAACAACCTCATACATCTTCTTCTTCTTCATCCTCGGCTTCCTTCAAACATCATCTCCTTCACCACAATCAAATTTCCTCTGGGGCCAAGAGTGACAGTAAGAGCTTGTCTGAAAACCATGATCATGTAGATGGGAATGGCAGATCTGATGGCCATGTCCTGAGGCATTTCTTCGATGATTGGCCAAGGACACTGCAAGAACAAGACCATGGTGAAAGCAATGGAAGCCAGAACAACAACACTGGAACATATCTTTCCATGTCAACACAGGGAATCACTTCCTCGGATGTGTCACTGAGACTGTCCACTGGTCATGCAGAGAATACATGTCACGTGGCTTCAGTGGGAGGACCACTCGCAGAGGCACTGAGATCATCCACCTCCACTTCTTCACCGACCAGTGTTCTCCTACAGTTGCCAACTAGTTCTGCTTGTAACACCAGCTTCATTAGCACCTAA 795 0.5019 MESCFSFAQWQELELQTLIFRYMLAGAPVPPQLLQPIKKSFLHSPPPFLLQLYHPPLLESGYYWGREAVDPEPGRCRRTDGKKWRCSREAVEGQKYCERHMHRGRNRSRKPVEQPHTSSSSSSSASFKHHLLHHNQISSGAKSDSKSLSENHDHVDGNGRSDGHVLRHFFDDWPRTLQEQDHGESNGSQNNNTGTYLSMSTQGITSSDVSLRLSTGHAENTCHVASVGGPLAEALRSSTSTSSPTSVLLQLPTSSACNTSFIST* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0646 264 MobiDBLite consensus disorder prediction 146 163 - -
Vra8g0646 264 MobiDBLite consensus disorder prediction 180 197 - -
Vra8g0646 264 PANTHER GROWTH-REGULATING FACTOR 3 3 264 - -
Vra8g0646 264 MobiDBLite consensus disorder prediction 97 163 - -
Vra8g0646 264 Pfam QLQ 5 37 IPR014978 GO:0005524|GO:0005634|GO:0006355
Vra8g0646 264 PANTHER - 3 264 IPR031137 GO:0005634|GO:0006351|GO:0032502
Vra8g0646 264 ProSiteProfiles QLQ domain profile. 4 39 IPR014978 GO:0005524|GO:0005634|GO:0006355
Vra8g0646 264 MobiDBLite consensus disorder prediction 178 197 - -
Vra8g0646 264 ProSiteProfiles WRC domain profile. 70 114 IPR014977 -
Vra8g0646 264 Pfam WRC 71 113 IPR014977 -
Vra8g0646 264 MobiDBLite consensus disorder prediction 113 145 - -
Vra8g0646 264 SMART QLQ_2 3 39 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0646 Vra-Chr8 10837695 10840463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0646 1 255 GRF Transcription Factor Family AT3G52910 46.278 5.41e-70 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Vra8g0646 WRC 2e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0646 - - gmx:100817197 392.504