Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0644 ATGCAAAGCAGAACAGTAGCAGTAGCGTATTATCTCTCCCTCTATTATTATTTAATAATAACAACACCATTTCACTCTCTCCCCTCCTTCTTCCAGCCCCTACATTTGAATCACCAACTCCTCTCTCTCTATCTCTCTCTCTTTATCACATTCTGCCTTGTTTCTACCAAACGCGCTTCCCAAACCCCAAACCTAGCTTCCTTAATCATGGCCGAGAAGCACTTGCGGGACCTGCTTCTGGAGGACCAAGAGCCCTTCCTTCTCAAACACTACATTTCGGAACGACGTGCCCTCCTCAAAACACCTTCCCCAAACACCACCTTAACCAAAAACACCTCAAACTCAAACTTCCCACTTAACAAATGCCTCCTCTCCTTCCACAACGCTACCAAATCTCCACTCTTGGAATTCGCGCCGCTCACCAAGAAGCACAGTCCCCTTAGGCCCTCCAACGCCAAAACCGCCACGCTCCTCCTTGAAGCCGCCCTCAGAATCCACAAACACGCCAAACCGAAGCCAAACAGGGCCTTGGGCATCTTCGGCTCGCTCTTCAAGAAACTCAGGACCCAACGGAAGAGGGGACAGATAAACGATGATGTTGTTGATGTTGGGTTGGTGGGATCCTGCGAGGGCAGACTCAGCAGTAGTGGCTTGTGGTCGGAGAGCGAGAGCAACGAGGACAAGTCTTTGGACTTGAAAACTTGTAGTAGTGACCACTCCTTCGATGACTCCGTCGAACAAGAGATTCAGTTCCTCAACTCTCATGATCTCTTCTTCTGCCAAACCCCTTTCCGTTTCTCACTCCGACAGATCCCCGACTACTCCCCCGGCTGCACGCCGGAATTCTCTTCGCCGCTCGGGTCTCCCCGTCGCCACACAACTCAGGACAATGAAGTTAGTAGTGGTGATGGCGTCAACAAATTTCAATCTGGGGAAGAAGAGGAAGATAAAGAACAATTCAGTCCAGTGTCTGTTTTAGACCCACCCTTCGATGACGATGACAACGACCATGGAGAAGATGGTTTTGATTTGGACTGTAACTATGCCAATGTTCAAAGAACTACGCAGAATCTACTAGACAGGCTCCGTAGATTTGAGAAGCTTGCAGAGCTAGATCCAGTGGAGCTTGAGAAGAGGATGTTAGACCAAGAAGATGAAACATTTATGGAAGAGGATGATGATTACGATGATGTTGAGAGCGAAAGAAAATGTGGAGAAGAAAAGGTTGTCGGGGAAAGTGTGGTTGAAATCCTGAGCCATTCAAGAGTTGATGAGAAGCAGGAAGCAGCTGAGGACCTTAAGAGGCTGGTTTATGATCTGATAATGGAGGAAGAGACAGAAGTGAGTTGCTCAGAAGGGAAGAACACAGTGGTGATGAGAAGGGTTTGCAGGAGGCTGGAATTATGGAAGGAAGTGGAGTGCAACACCATTGATATGATGATTGAAGAGGATTTCTGTAGAGAAGAAGGTAGTTGGAAGAAAAATGGTGAGCACAGAGGGGAGCTAGTTCAGCAAGTTGAGCTTGCAATCTTTTTCTATCTAGTGGAGGAACTTTCAGAGGAACTAGTATGTTGTTAG 1578 0.4759 MQSRTVAVAYYLSLYYYLIITTPFHSLPSFFQPLHLNHQLLSLYLSLFITFCLVSTKRASQTPNLASLIMAEKHLRDLLLEDQEPFLLKHYISERRALLKTPSPNTTLTKNTSNSNFPLNKCLLSFHNATKSPLLEFAPLTKKHSPLRPSNAKTATLLLEAALRIHKHAKPKPNRALGIFGSLFKKLRTQRKRGQINDDVVDVGLVGSCEGRLSSSGLWSESESNEDKSLDLKTCSSDHSFDDSVEQEIQFLNSHDLFFCQTPFRFSLRQIPDYSPGCTPEFSSPLGSPRRHTTQDNEVSSGDGVNKFQSGEEEEDKEQFSPVSVLDPPFDDDDNDHGEDGFDLDCNYANVQRTTQNLLDRLRRFEKLAELDPVELEKRMLDQEDETFMEEDDDYDDVESERKCGEEKVVGESVVEILSHSRVDEKQEAAEDLKRLVYDLIMEEETEVSCSEGKNTVVMRRVCRRLELWKEVECNTIDMMIEEDFCREEGSWKKNGEHRGELVQQVELAIFFYLVEELSEELVCC* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0644 525 PANTHER OS04G0572500 PROTEIN 70 524 - -
Vra8g0644 525 MobiDBLite consensus disorder prediction 286 307 - -
Vra8g0644 525 MobiDBLite consensus disorder prediction 279 343 - -
Vra8g0644 525 PANTHER - 70 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0644 Vra-Chr8 10686874 10690782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0644 72 523 TRM (TON1 Recruiting Motif) Superfamily AT2G36420 29.200 4.70e-30 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0644 - - vra:106769918 909.442