Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0641 ATGGCCGCAGTGGCTTATGACGTGGCAGCTTATGCTCTCAAGGGTAAGGATGCGGAGCTGAATTTCCCTGACTCCGCTTCCTCCCTTCCTGTCCCCGATTCACTCTCGGCGCGTGACATTCAGGTGGCGGCAGCGGCTGCGGCGGCGGCTGCCGGAGCTGCGAAGGATGCTATGCAGACGCCAACAGGGAATAATAAGTCTTCAGGGGTACAAGAGAAGCAAGCAGGGACAAGTAACGAGTTCGTGGACGAGGATTTGATCTTTGACATGCCCAATGTTCTGGTAAATATGGCTGAGGGAATGCTGCTTAGTCCTCCTCCTTTTGACATTGGTGTGGAACCTAATAGCCCAGAAAACATCGAACATGAGACAAGCCTGTGGAATTTCCCATAA 393 0.5293 MAAVAYDVAAYALKGKDAELNFPDSASSLPVPDSLSARDIQVAAAAAAAAAGAAKDAMQTPTGNNKSSGVQEKQAGTSNEFVDEDLIFDMPNVLVNMAEGMLLSPPPFDIGVEPNSPENIEHETSLWNFP* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0641 130 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 1 130 - -
Vra8g0641 130 MobiDBLite consensus disorder prediction 53 78 - -
Vra8g0641 130 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF024 1 130 - -
Vra8g0641 130 MobiDBLite consensus disorder prediction 58 77 - -
Vra8g0641 130 Gene3D AP2/ERF domain 1 24 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0641 Vra-Chr8 10510868 10511832 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0641 1 130 AP2-EREBP Transcription Factor Family AT2G36450 56.522 1.49e-28 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0641 - - pvu:PHAVU_007G222600g 226.483