Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0624 ATGACAAGGGAAGGGAATGCTACTCTGAACTTTATCCCAGAATTTGCATGTTACAATACAACGTTTGATCTTAGCAACATAATCTGGAGGAGTGATAATGTCATTTCAGAACGTGTTCCTCTTCTGTCTATTCAAATTGCCTACAATATCCTTGCATCTAGTTTTTTTCACCACATCCTCAAGCAATTCCACCTACCTCTTACGGTTGCCCAGATGCTTGGTGGTGTGCTTTTGAGTTCATCATTTTTGGGAAGAATCCCTGGAGTTTTTCACATGATTTACCGTCCGGAAGGAATCATGAGTGTTGAAACCTTTGCGAATGTTGGAATCATGTACTATGTGTTCCTTACTGGGTTGGAAATGAACTGCGACACCATCTTGAGATCAAGCAAGCAGGCTGTAGTCATTGCTGTTGCAAGCATTCTTATTCCAGCATTGGTTGGAGCTGGTTTTCTTGCTCTACAGCATGACTTAGCAGGCGGATCAAGCGTTGCGCTCACTGCTAAAGGGTATATGTTTTGGTGTGCAATTCTTTCTGTCACCAGTTTTCCAGTCCTTGCAAGGCTCCTATCAGATCTCAAGATCCTCTACACAAGGCTTGGAAAAGATGCCTTAACAGCAGCCATTCTAATTGATGCATTTGGCTGGGTTTTGTTCTCACTCTTCATTCCCTTTTCCCACGCGGGTGGAAAACCACTCCTCTCACTAATATGCACATTGCTGTTCATTGCCTTCTGCTTCTGCGTGGTGCGTCCAATTCTGGCTCGAGTGGTTGAACACAGAATGAGGTCTGAGTCATGGAACTCCTCAAAGTTGCTGGATGTGATGATGGGACTTTTTATTTGTGCGTACATCACAGACTTGCTTGGATCACACCATGTTGTTGGGGCCTTTGTGTATGGACTAATTTTGCCCAGTGGGAAGTTTGCTGATTTATTGTTGGAAATGTTGGATGATTTTGTTACTGCAATTATTGTTCCTGTCTACTTTGCAAGTTTTGGCTTTAGACTAAACCTGGAGTCACTTTGGTCTGAAAACCACTCAGTGTTGCTTCCTCTCTTCATGGTGTTCTTGTTAGCCATACCAAAAATTTTGAGCTCTTTGCTGGTCACTGTCTACTATGGTATGTCTTCAAGAGATGGAGTTGGCCTTGGATTGCTCCTCAACACCAAGGGCATCATGGCAGTGATTCTTATAAGCATTGCCTGGGACAAAAGTATTTTGGACCCATATGCTTTCACAATCATGATCCTTGCAGTACTATTCATGACTACGGTGGTATCTCCCTTTATTAATGCCATCTACAAGCCGAAACTTCGGTTCAAGCAGACCCAGCAAAGGACTGTGCAGAAACTATGGTGCGAAGCAGAACTTCGAGTTGCAGCTTGTGTCCACAACTCTCACCAAGCCCTTGGCATGATCTATGTTCTTGAAGCCATAAATGCCACCAGAACTTCCCCTTTACATGTCTCAGTCCTTCACCTTGTGGAACTCACAAGACGAGGCACTGGCCTTCTTGTGGCACAAATCGACAACTCAAATGTTCAAGGGGGATCCTCAGAGCAGTATGGATCACAAGAAGAGTTTGAGACCATATACAATGCATTCAACGAGTTTGTGGAGGTATACAAAGCTGTGAGATTTGACACATCAGGCATTGTTGCAACCTATGAGACAATCCATCAGGATATATACAATGTCACAGAAGAGAAACGAGCAAACCTTATTCTCCTACCATTCCACAAAGAACTAAGCTCGGGAGAGTTAGAAACAACCAAAACAGCATTCTGTGACATAAACCAGAACGTGTTGCAGGCACCACCTTGTTCTGTGGGAATCCTTGTCAACCGTGGACTGAGGTCATTGTCCACTGCAACAATGAGCATCATTGTGATATTCATCGGAGGGCCTGATGATCGGGAAGCCTTGTCGATCGCATGGAGAATGGCATCACATTCAGCCACAAAGTTGCATGTAGTTAGGCTTCTGGTGTCAGGTACTGAGGTTGCAGAAGGAAAAGCATTCCAGAATGATTCCAGTGGAGTGTTATCTACAGAGATGGACAGTGTTATGCAGAAAGAGCTAGATGATGAACACATATTTCACTTCAGGCACAAAGGGTTGCACAACAGTGACGCCATCACATACTCAGAGAGCGAACTGAGGTTAGAAACTGGTGAGGAGATTCCTTTGGTCCTCCATGAGATAGACCAAAAAGGGTGTGACTTGTACATTTTGGGACAAGGTAGTGGCAATAACTACACAGTTTTTAAAAGGTTGTTGGAATGGTGTGACAGCCCTGAACTTGGGGTCATGGGGGACATTGTAGCTTCAGCCAGTTTTGGCACAAACTCATCACTGCTTGTTGTGCAGCAATACACCATGGAGAGAAAGTCTAAACTTCATTGTAGCAGAAAACATCACACTAGTAAGGTCTGTGATGAAATTTTGTGA 2454 0.4397 MTREGNATLNFIPEFACYNTTFDLSNIIWRSDNVISERVPLLSIQIAYNILASSFFHHILKQFHLPLTVAQMLGGVLLSSSFLGRIPGVFHMIYRPEGIMSVETFANVGIMYYVFLTGLEMNCDTILRSSKQAVVIAVASILIPALVGAGFLALQHDLAGGSSVALTAKGYMFWCAILSVTSFPVLARLLSDLKILYTRLGKDALTAAILIDAFGWVLFSLFIPFSHAGGKPLLSLICTLLFIAFCFCVVRPILARVVEHRMRSESWNSSKLLDVMMGLFICAYITDLLGSHHVVGAFVYGLILPSGKFADLLLEMLDDFVTAIIVPVYFASFGFRLNLESLWSENHSVLLPLFMVFLLAIPKILSSLLVTVYYGMSSRDGVGLGLLLNTKGIMAVILISIAWDKSILDPYAFTIMILAVLFMTTVVSPFINAIYKPKLRFKQTQQRTVQKLWCEAELRVAACVHNSHQALGMIYVLEAINATRTSPLHVSVLHLVELTRRGTGLLVAQIDNSNVQGGSSEQYGSQEEFETIYNAFNEFVEVYKAVRFDTSGIVATYETIHQDIYNVTEEKRANLILLPFHKELSSGELETTKTAFCDINQNVLQAPPCSVGILVNRGLRSLSTATMSIIVIFIGGPDDREALSIAWRMASHSATKLHVVRLLVSGTEVAEGKAFQNDSSGVLSTEMDSVMQKELDDEHIFHFRHKGLHNSDAITYSESELRLETGEEIPLVLHEIDQKGCDLYILGQGSGNNYTVFKRLLEWCDSPELGVMGDIVASASFGTNSSLLVVQQYTMERKSKLHCSRKHHTSKVCDEIL* 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0624 817 Gene3D - 41 444 IPR038770 -
Vra8g0624 817 PANTHER CATION/H + ANTIPORTER 12 801 - -
Vra8g0624 817 Pfam Sodium/hydrogen exchanger family 51 431 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Vra8g0624 817 PANTHER CATION/H(+) ANTIPORTER 21-RELATED 12 801 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0624 Vra-Chr8 10024120 10026970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0624 17 793 Antiporter Super Family AT2G13620 35.406 8.15e-165 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0624 - - gmx:100792990 1162.52