Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0596 ATGAGTGGCGATTTGCGACCTTCTGCCTCCGCTGCTTCCACTTCAACTTCTCCTATACTGATTAGTCTAGCTACAAAGTCCTTTGGGAAAAGGCATGAAGATTGCTCCCATAGCCCTTCCTCTGGAAAAGAATTCAGTGAAGCGTTTGTGAAACGCAGGAAGGTGAATCAAGCATTGGTGACATTCAGGAACTTGGTCAATAAACTAATGCATCAGTACAAAGTGTACGAACCTAAGAATCCTAGGGCCAAGAATAAGAATAAAGCTCTATTGGAAGCCACAATGACAATGAGAAGAGAACATCAATGGGAGAACACTCAACCGTGCGTGAGCAATATACTAGGAATCGATGTGGGTGATATTTTTCAGTCCTGGGTTGAACTCAATGTCATTGGCCTCCATAGGCAGTTTTGGAATGGAATTGATTATAAGATAATGGACAATAGCTTGTTGGCCATAAGCATTGTGGCAACAGATCGCTATGATAATGCTAGAAGATATAATGGTACCTTGGTTTATGAAGGTCAAGGAGGAAATCCTACTGTTGGAGAAATGTTTCACTTCGTGATTAAAAACTGGAAGAAGGAAGAAGGAAATTATGACTAA 606 0.4109 MSGDLRPSASAASTSTSPILISLATKSFGKRHEDCSHSPSSGKEFSEAFVKRRKVNQALVTFRNLVNKLMHQYKVYEPKNPRAKNKNKALLEATMTMRREHQWENTQPCVSNILGIDVGDIFQSWVELNVIGLHRQFWNGIDYKIMDNSLLAISIVATDRYDNARRYNGTLVYEGQGGNPTVGEMFHFVIKNWKKEEGNYD* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0596 201 PANTHER - 29 199 - -
Vra8g0596 201 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 29 199 - -
Vra8g0596 201 ProSiteProfiles YDG domain profile. 111 201 IPR003105 -
Vra8g0596 201 Pfam SAD/SRA domain 111 179 IPR003105 -
Vra8g0596 201 Gene3D - 92 199 IPR036987 -
Vra8g0596 201 SUPERFAMILY PUA domain-like 93 184 IPR015947 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0596 Vra-Chr8 9311421 9312222 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0596 65 179 Su(var)3-9 homologs AT1G73100 33.613 9.64e-14 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0596 - K10638 vra:106770189 393.66