Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0584 ATGTTGATCATGCTTTTGGTGTTCATCAACTTGCTGATACAAACTCAACTTGGAGCAAGCACTGTGGTTGACCACAACACTTTCTCCTTTGTAACTTTCACTTCTGAGAGTTGCACCAATGGTGATCTGCTTTGCATGGGTTCAGCCACTGCTGGCAATGGGTATTTGAGTCTCACCCCAGAGCCACAACAAAGCAGCAACTCAAGTTCAACACTGTCTAACACAACCAGAAATGTTGGAAGGGTTTTGTACCCTCACCCTGTGAATGTTTGGCCTGCAATTATCTCCACCACATTCACTCTTAGGATCACTCCTTTTTCAGAAAATTCAACCAGCTATGGGCATGGAGTGGCACTGGTGTTTGCTAACGATAATAGGCCCTCACCAAATGGCTCATATCTTGGCATCTTTGATCAGTCTTCACCAGGTGGGGGTTTTCAACAGCTAGCTGTAGAGATGAACACTTTGATGAACGAATTTGATCAAGATGGAAGCCACATTGGGATAGTGACAACAAGCATCACAAATCCACTTGCATCTGAGAGTCTGAATAGCACTGGCATTGACCTCAGAAGTGGAAGAGACATTGAGGTCAAAGTAGACTATGATGGATGGAGTAAAATGATTTTTGTCTCTGTGGGATACCCAGAAAGCCAATTGAAGAATGTCCTCAACCATTCAATTGACCTACCTGATATACTTCCAAGCTCCATTTATGTTGGTTTCACAGCCTCCACAGGCAACACTTTTCCTGAAAGCCACCAGGTCCTCAACTGGGTATTCACATCAGTGCCACTTCCTTTTCTTTCTGTTCAACACAGTAGAGTTGGCACCATCAAGACCTTATTGGCAATTGCCCCGGTGTGCTTATTTCCTTTTATTTCGATAGCTGTTTGGAGAAGATATGTGAGGGGTAAAAAGAAGGGTGATATAGAAAGCCTATCAAAGAAGGCTGCAGATATCCCCAAGGTGTTCACCTACAAGCAACTATCAAGAGCCACATGCAACTTCAGCCAGGAAAATCTTCTGGGAAAAGGTGCATTTGGCAGTGTTTATAAAGGAATCATATCATACTCTGGAAAAACTGTTGCAGTAAAGAAGATTTCAGCAACTTCTAAACAAGGTGAAAGAGAGTTCTTAGCTGAAATATGTACCATAGGGCGTCTTAGCCACAAAAACTTAGTGAAGCTCCAAGGCTGGTGCATTGAAGGCAAGAATCTTCTCTTGGTTTATGAGTACATGCAAAATGGAAGCCTTGATCACTTTATAGCCAAAGGCAGTCTGAACTGGAAACTCAGGCACAGAGTATTGACAGGATTGGCATCAGCATTACTCTACCTTCATGAAGAGAGTGGAAACCCTTTTGTTCACAGAGATGTTAAGCCAAACAATGTCATGTTGGACTCAAATCACGATGCTCATTTAGGAGATTTTGGGCTAGCAAGACTACTCAAAGGTGAAGGCTCAGTGACCACAAATCTAAATGGAACTCTAGGATATTTGGCTCCTGAACTAAGCTTCACAGGGAGAGCTACACCAGAATCAGACGTGTATAGCTTTGGCATGGTAGTTCTTGAAGTGATATGTGGGAAAAGGTTAAACTGGATAAAGCAAGGGAACAGTTTTGTGGATTCTGTGTGGAATTTGCACGCAGAAAATGGTTTGGTTGAGTGTGTTGACAAAAAACTAGAGAACAAATTTGATGAGGAAGAAGCTAAAAGGGCACTGATAGTTGGTTTGGCATGTTTGCATCCTGATTCCATGTTGAGGCCAAGGATGAGAAAAGTGGTGAACATTTTTCAGAACCCAAATGAACCTTTGATGCAGTTACCAAAGGTGAGGCCTACAGGAGTTTATGTATCAGTTTCTTGCAGTTCATCATCCTCAAACACTACCTCTAAAACTGAGGTGCAGCTCCAATCATCCACAACATCATCACATGAAAAATTCAACAGTATATGA 1962 0.4241 MLIMLLVFINLLIQTQLGASTVVDHNTFSFVTFTSESCTNGDLLCMGSATAGNGYLSLTPEPQQSSNSSSTLSNTTRNVGRVLYPHPVNVWPAIISTTFTLRITPFSENSTSYGHGVALVFANDNRPSPNGSYLGIFDQSSPGGGFQQLAVEMNTLMNEFDQDGSHIGIVTTSITNPLASESLNSTGIDLRSGRDIEVKVDYDGWSKMIFVSVGYPESQLKNVLNHSIDLPDILPSSIYVGFTASTGNTFPESHQVLNWVFTSVPLPFLSVQHSRVGTIKTLLAIAPVCLFPFISIAVWRRYVRGKKKGDIESLSKKAADIPKVFTYKQLSRATCNFSQENLLGKGAFGSVYKGIISYSGKTVAVKKISATSKQGEREFLAEICTIGRLSHKNLVKLQGWCIEGKNLLLVYEYMQNGSLDHFIAKGSLNWKLRHRVLTGLASALLYLHEESGNPFVHRDVKPNNVMLDSNHDAHLGDFGLARLLKGEGSVTTNLNGTLGYLAPELSFTGRATPESDVYSFGMVVLEVICGKRLNWIKQGNSFVDSVWNLHAENGLVECVDKKLENKFDEEEAKRALIVGLACLHPDSMLRPRMRKVVNIFQNPNEPLMQLPKVRPTGVYVSVSCSSSSSNTTSKTEVQLQSSTTSSHEKFNSI* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0584 653 SUPERFAMILY Protein kinase-like (PK-like) 321 634 IPR011009 -
Vra8g0584 653 CDD lectin_legume_LecRK_Arcelin_ConA 28 263 IPR001220 GO:0030246
Vra8g0584 653 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
Vra8g0584 653 PANTHER - 288 644 - -
Vra8g0584 653 PANTHER - 30 265 - -
Vra8g0584 653 SUPERFAMILY Concanavalin A-like lectins/glucanases 31 264 IPR013320 -
Vra8g0584 653 Pfam Protein kinase domain 338 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra8g0584 653 Gene3D Transferase(Phosphotransferase) domain 1 414 609 - -
Vra8g0584 653 SMART serkin_6 337 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra8g0584 653 MobiDBLite consensus disorder prediction 626 653 - -
Vra8g0584 653 ProSiteProfiles Protein kinase domain profile. 337 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra8g0584 653 Pfam Legume lectin domain 27 264 IPR001220 GO:0030246
Vra8g0584 653 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.1 288 644 - -
Vra8g0584 653 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.1 30 265 - -
Vra8g0584 653 ProSitePatterns Protein kinases ATP-binding region signature. 343 367 IPR017441 GO:0005524
Vra8g0584 653 Gene3D Phosphorylase Kinase; domain 1 322 413 - -
Vra8g0584 653 Gene3D - 23 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0584 Vra-Chr8 9057572 9060016 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0584 4 636 Receptor kinase-like Gene Family AT5G55830 36.819 1.02e-111 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vra8g0584 Pkinase 2.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0584 - - vun:114190285 1170.22