Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0583 ATGGTAATGGCTGTGGCTAGTGGTGACTTGCTAGGTGAGAAAGCTTCGGCGATGAGAGCGTCTCTGGAGAGAAGCCAGACCATCACAGACGACGTCGTTTCGATTCTGGGCTCCTTCGACCACCGCCTTTCCGCCCTGGAAACCGCCATGCGACCTACCCAGATCAGAACACATTCTATTCGGAAAGCTCACGAGAACATTGATAGGACTTTGAAGACTGCAGAGGCCATATTGGTCCACTTTGATCAATATTATCAGGCAGAAGCAAAAATAATTAAAGGACCACATGAAGATGTGAAGAGCTATCTTGAAGCAATTGATCAGCTGAGACGAAACATTAGATTTTTTAACAATAAAAAGGGTTTTAAGAATGATGATGGTATTGCCATCCGTGCCAATGATTTGATAGCCGAAGCTATTTCTAAGCTAGAAGAAGAGTTCAAGCGGCTATTATCATCTTACAGCAAACCTGTGGAGCCTGAACGCCTCTTTAGTTCTCTTCCAAACACAATGCGACCTTCATCAGCATCACCAGGTCATGATGATGATTCCAGCAGCAAGAATCATTCTTCTTATATCCATTCTGAGCCACATAAAAATAATGCTGATACTGTTGTATACACACCCCCTGTTCTTATACCACCAAGAATATTGCCGTTGCTAAATAATTTAACCGAGCAAATGGTTCAAGCTGGTCACCAACAACAGTTGCTCAAAATATACAGAGATACTCGTTCTAAAGTATTAGAAGAAAGCCTACAAAAGCTTGGAGTTGAGAAGCTCAACAAAGATGATGTTCAAAAGCTACAATGGGAGGTTTTGGAAGCCAAAATTGGAAACTGGATTCATTTCATGCGTATTGCTGTCAAATTGTTGTTTGCTGCCGAACGAAAAGTCTGTGATCAGATATTTGAAGGATTTGATTCGCTTAGTGATCAGTGTTTTGCTGAAGTAACTACAAACAGCATTTCCATGCTGCTTAGTTTTGGAGAAGCTATTGCCAAAAGCAAGAGATCACCTGAGAAGTTATTTGTGCTTTTGGATATGTATGAAATATTGCAAGAAATCCATTCAGAGATTGAAATACTCTTTAAAGGAAGAGCTTGCTCCAAAATAAGAGAAGCTGTAATGGGTTTGACAAAACAGCTTGCACAAACAGCCCAGGAAACCTTTGGAGATTTTGAAGAAGCAGTTGAAAAAGATGCTACAAAGACTGCAGTAACTGATGGAACTGTCCATCCTTTGACAAGCTATGTGATTAACTATGTGAAGTTTTTATTTGACTATCGGTCTACCTTAAACCAACTTTTCCAAGGGATTGAAGGTGAAAGTGATTCTTCACAGCTAGCTTCTGTGACCATGAGAATATTGCAAGCTCTTCAAACCAATTTAGATGGGAAATCTAAGCAATATAGAGACCCTGCTTTGACACACCTATTTCTCATGAACAATATTCATTATATTGTCAGATCAGTTCGAAGGTCTGAAGCGAAGGATTTGATGGGGGATGATTGGATACAACGACATAGGAAAATTGTGCAACAGCATGCCAATCAATACAAAAGAAATGCTTGGGCAAAGATTCTTCAATCCCTCTCAATTCAGGGTCTCATCTCATCAAGTGGTGGGGGTAGTACTGCTGGTGGGGATGGGGGCAGTAGTGGTGCTTCAAGAGCAGTTGTTAAAGAAAGGTTTAAGGCATTCAATACTATGTTTGAGGAACTCCATCAGAAACAATCTCAGTGGACAGTACCAGACACAGAGTTGCGAGAATCTCTCATTCTTGCAGTTGCTGAAGTCTTGTTGCCTGCCTATAGATCATTTGTGAAACGTTTCGGGCCTCTGGTGGAGAATGTAAAGAGTAGTCAGAGGTACATCAAATACAGTGCTGAAGATCTCGAGCGAATCCTAGGTGAATTTTTTGAAGGAAAAAACATGAATGATTCCAAGCGGTAA 1956 0.409 MVMAVASGDLLGEKASAMRASLERSQTITDDVVSILGSFDHRLSALETAMRPTQIRTHSIRKAHENIDRTLKTAEAILVHFDQYYQAEAKIIKGPHEDVKSYLEAIDQLRRNIRFFNNKKGFKNDDGIAIRANDLIAEAISKLEEEFKRLLSSYSKPVEPERLFSSLPNTMRPSSASPGHDDDSSSKNHSSYIHSEPHKNNADTVVYTPPVLIPPRILPLLNNLTEQMVQAGHQQQLLKIYRDTRSKVLEESLQKLGVEKLNKDDVQKLQWEVLEAKIGNWIHFMRIAVKLLFAAERKVCDQIFEGFDSLSDQCFAEVTTNSISMLLSFGEAIAKSKRSPEKLFVLLDMYEILQEIHSEIEILFKGRACSKIREAVMGLTKQLAQTAQETFGDFEEAVEKDATKTAVTDGTVHPLTSYVINYVKFLFDYRSTLNQLFQGIEGESDSSQLASVTMRILQALQTNLDGKSKQYRDPALTHLFLMNNIHYIVRSVRRSEAKDLMGDDWIQRHRKIVQQHANQYKRNAWAKILQSLSIQGLISSSGGGSTAGGDGGSSGASRAVVKERFKAFNTMFEELHQKQSQWTVPDTELRESLILAVAEVLLPAYRSFVKRFGPLVENVKSSQRYIKYSAEDLERILGEFFEGKNMNDSKR* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0583 651 Pfam Exo70 exocyst complex subunit 280 638 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vra8g0583 651 MobiDBLite consensus disorder prediction 167 181 - -
Vra8g0583 651 Gene3D Exocyst complex component Exo70 75 651 - -
Vra8g0583 651 MobiDBLite consensus disorder prediction 182 196 - -
Vra8g0583 651 PANTHER EXOCYST COMPLEX COMPONENT EXO70A1-LIKE 36 647 - -
Vra8g0583 651 PANTHER EXOCYST COMPLEX PROTEIN EXO70 36 647 IPR004140 GO:0000145|GO:0006887
Vra8g0583 651 MobiDBLite consensus disorder prediction 162 202 - -
Vra8g0583 651 SUPERFAMILY Cullin repeat-like 77 642 IPR016159 -
Vra8g0583 651 Coils Coil 99 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0583 Vra-Chr8 9029213 9051339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0583 3 651 EXO70 exocyst subunit family AT5G03540 70.015 0.0 944
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0583 K07195 - gmx:100775958 1120.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0358 3 4300271 4302568 Vra8g0583 8 9029213 9051339 PCT