Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0518 ATGAACATAGATGATATGGAAATGGATATTCCGCTCCCTGATGAACTCGAGTTTCTGGAATCAAATTTTCACGAACCCGAGCAAAATCAAGAAGAAGGAGAAGATCATCATTATCACTTCGCAGACCTCGAAGCCCCGGCTGAACCGTACTCTCCGCAACCGCCGCCAGATCTCGAGGCTCCTTCGGTGGATATCGAATCAAGCGGTCACAAGCGGTCGCGTTCGAGTTCACCTCCCGAAGAGGACAAGAGAGCGAAAGTTAGGGTTACCGTCGAGGAGGTTTCCTCCGCCGAGGAGGCCGCCGACGAGGACTGGCTTCGCTACTCTCCTCCACCGCAGGAGCCGGCGGCAAAGGAAACAACGTTCGCGAAGGAGAAGACGTTGTCGAGATTCGCGTCGGAGATTGACGGCGAGTGCATGCCGATCACCGCGCCCAACGGCGACAGGGTTTATGCGAAGCTCACCCGGTTTCAAGGAGAAGAGCGCGTGAAGACGCTCGATTGCAATGGATATTCTGCTGAACTTAGTTCCGAACCGATTAATGTTATACTTGAGAGGCTGGAGCAAGAGGCTTTTGCTAAGGCCTTGGAAGCTAGTTCTGAAGGTCAAAGTGTTCCAGATGTTCCTGAAGTGCAAATGGTTAATGAGCAACTTTGGGTTGATAAATATGCTCCGAAATCCTTCACCGAGCTTCTTAGTGATGAACAGACAAATCGTGAGGTACTGTTGTGGTTGAAGCAATGGGATTCTGTTGTGTTTGGATCTGAAATTCGAAGCACATCAGATGATGTTTTGTCTGCTTTGAAACGCCATTCTTCTATTGTCCACCATCAGAAACCTTTGAATTCAAAGTTTCCTAGGAAGAACGGAGGATCCAAATGGAGTAATGGGGGAGGGTATGTAAATTCTGTAAGTATGGATGACGGTGGTAGTTCAAAGAGTATTCAAGATGCATGGAGTACGAAGTCAAGGAATATTGGTCCCCCAGAACAAAAGATCCTTCTGCTATGTGGACCACCAGGTCTTGGAAAAACAACACTAGCACATGTAGCTGCTAGGCATTGTGGATATCATGTGGTAGAGATTAATGCTAGTGATGATCGTTCCACATCAACAATTGAAGCCAAGATTCTTGATGTGGTTCAAATGAACTCTGTCTTGTCTGATTCAAGGCCGAAGTGTCTGGTGGTGGATGAAATTGATGGAGCTCTTGGTGACGGTAAGGGTGCTGTGGAGGTTCTTCTAAAGATGATTTCTACCGAAAGGAAGCCTTATGCGGGGAAACAAATTGTGGGCAGAGGACAACAGGAGAGAAAGTCATCAAAAAAGGGTTTGAAAACTGCTTCGCTTTCAAGACCTGTGATATGCATTTGTAATGATCTATATGCACCTGCCTTAAGACAATTGCGTCAGGTTGCTAAGGTTCATATATTTGTTCAACCAACAGTCAATCGTGCAGTGAGCAGGCTGACATACATATGCAAGAAGGAGGGGATGAAAGCCAGTGCAATTGCACTCACTGCTCTTGCAGAATATACAGAATGTGATATTAGATCATGCTTGAACACTCTCCAATTTCTCTCAAAGAAGAAAGAAGCTCTCAATGTGTTTGATATTGGTTCTCAAGTAGTTGGCCAGAAGGACACATCAAAGAATGTTTTTGACATCTGGAAAGAGATTTTCCATAAGCGAAGAACAAAAAAGTTAGAAAGAAAATCTCATAGAGGGAATTCCTTTGACTTTGACTCATTGTACTCCCTTGTGTCAAAACGAGGTGATAGCGACTTGATTCTGGATGGAATTCATGAAAATGTTTTGCGGCTCAATTATCATGACCCACTGATGCAGAAAACTGTCAAGTGCTTCAACAATCTTGGAGTTTATGATCTATTGCATCAATATATAGTGCATACACATCATATGTCCCTTTATGTATATTTGCCCCTAGTTGCAATTACTGTACATCATATTGTATCTCAAATTCAGAAACCAAACATTGAGTGGCCAAAGTCCTATCAGAGATATCGTACATTGATGATGGAAAAGATGGACATTTTGAATAATTGGCACCACAAAATCCCACCGCATATTGCAAGGCACTTATCAGCTAGTTCCTTTGTAGAAGACTTAATTTCTCCATTGTTACATATTCTGTCCCCGCCAACTATAAGACCGGTAGCATTACAAGTACTATCTGACACGGAGAAGAATGATCTTGCTCAACTAGTTAGCAAAATGGTATCATATGCTATAACATATAAAACTGTGAAATCAGATATGCCGCATCAAACCCTGAAGTCTGAAGTAGCAGATGGTTTGGCACTGTCTTTTGTTCCTCCTATCAGTGACTTTATAAACTTCAAGGATTATACTTCAAATCATTATGTGCTTTCTGTAGCTATGAAGCAGCTTTTGGTACATGAGGTTGAAAAGCATAAGATTTTACAAGTTGGTGTTGACAAAACTAGGGCTTTAGCAAATGAAGGGCATGGAATCATTGAGACTGAAACTCACAACATCCCATTAGCCAATACCAATGCTGTGGCAAGGAAATTAAATGCAAATCCCACAATAGTTTCATCAAACTTGAATTCCCATAAAAGTTCAAGTACAACAGATATTGGGAAACCACAAAACGTGGGAAATATTAAAAAAGCAACCAGAAGTTCCTCCAGTTTCTTTGATAGGTTTAAAAAGGTAAATACTAAGGGCGTACAAAGTAATGACAGATCTCTACCAGAAGAATCTATCTTGGAGAAAGAACGATACCCTTTACTTTTTAAATTTAATGAGGGCTTTACTAATGCAGTCAAAAGGCCTGTCCGTATTCGGGAATTTCTATCTTAA 2847 0.4218 MNIDDMEMDIPLPDELEFLESNFHEPEQNQEEGEDHHYHFADLEAPAEPYSPQPPPDLEAPSVDIESSGHKRSRSSSPPEEDKRAKVRVTVEEVSSAEEAADEDWLRYSPPPQEPAAKETTFAKEKTLSRFASEIDGECMPITAPNGDRVYAKLTRFQGEERVKTLDCNGYSAELSSEPINVILERLEQEAFAKALEASSEGQSVPDVPEVQMVNEQLWVDKYAPKSFTELLSDEQTNREVLLWLKQWDSVVFGSEIRSTSDDVLSALKRHSSIVHHQKPLNSKFPRKNGGSKWSNGGGYVNSVSMDDGGSSKSIQDAWSTKSRNIGPPEQKILLLCGPPGLGKTTLAHVAARHCGYHVVEINASDDRSTSTIEAKILDVVQMNSVLSDSRPKCLVVDEIDGALGDGKGAVEVLLKMISTERKPYAGKQIVGRGQQERKSSKKGLKTASLSRPVICICNDLYAPALRQLRQVAKVHIFVQPTVNRAVSRLTYICKKEGMKASAIALTALAEYTECDIRSCLNTLQFLSKKKEALNVFDIGSQVVGQKDTSKNVFDIWKEIFHKRRTKKLERKSHRGNSFDFDSLYSLVSKRGDSDLILDGIHENVLRLNYHDPLMQKTVKCFNNLGVYDLLHQYIVHTHHMSLYVYLPLVAITVHHIVSQIQKPNIEWPKSYQRYRTLMMEKMDILNNWHHKIPPHIARHLSASSFVEDLISPLLHILSPPTIRPVALQVLSDTEKNDLAQLVSKMVSYAITYKTVKSDMPHQTLKSEVADGLALSFVPPISDFINFKDYTSNHYVLSVAMKQLLVHEVEKHKILQVGVDKTRALANEGHGIIETETHNIPLANTNAVARKLNANPTIVSSNLNSHKSSSTTDIGKPQNVGNIKKATRSSSSFFDRFKKVNTKGVQSNDRSLPEESILEKERYPLLFKFNEGFTNAVKRPVRIREFLS* 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0518 948 CDD AAA 329 432 - -
Vra8g0518 948 Gene3D - 216 479 IPR027417 -
Vra8g0518 948 MobiDBLite consensus disorder prediction 64 105 - -
Vra8g0518 948 Gene3D - 481 551 - -
Vra8g0518 948 MobiDBLite consensus disorder prediction 18 43 - -
Vra8g0518 948 MobiDBLite consensus disorder prediction 1 120 - -
Vra8g0518 948 SMART AAA_5 330 484 IPR003593 -
Vra8g0518 948 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 6 947 - -
Vra8g0518 948 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 217 529 IPR027417 -
Vra8g0518 948 MobiDBLite consensus disorder prediction 862 881 - -
Vra8g0518 948 CDD HLD_clamp_RFC 481 539 - -
Vra8g0518 948 Pfam ATPase family associated with various cellular activities (AAA) 334 460 IPR003959 GO:0005524|GO:0016887
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0518 331 611 Core DNA Replication Machinery Family AT5G22010 27.946 1.14e-14 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0518 K11269 - gmx:100785041 1509.2