Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0486 ATGGTTTTGGTTGATGAAATGAATGAGGAATTAAATACGGATGAAGAGAGTAGTTTAAGGTTGGATCCTACTTTGGACATGTCTTTTGACACAATGCAAGATGCAAAGAAATTTTATCAAGACTACGGTAGAAGATGTGGATTTGGCATTCAAACCAGAACTTCTAAAAAGGATAGCAACAACGTGGTGTATTACTTGAGATTGGTTTGTTCTAGGGAAGGTAAATATGTTTCCAACATTCGTCTAGAGGTCAAAACTCTTCCCAGTCAGACTAATCAATGCCATGCTGGAATAACCATTGCACGAAAAAATCACAAATGGTTTGTTAGAACTGTAGTTTTAGATCACAGTCATGAGCTGTGTCCACAAACCTCCAATCTAATCTGTGGTAATAGGCAATTGAACATGCATGCCAAACACACTTTGGAAGTGAATGATGATGCTGGTGTTCGTATTAATAAGAGTTTCCTTAGCATAGTTAGTGAAGCGGGTGGATATGAAAACATGCAATTTGTTGAACGAGATGCTAGGAACTACATTGGTCAGCATATGTGTAAGGAAGGTGATGGACAAGCATTGCTTCGACACTTTTCAAAAATGAGAGACCAGAATAATGAATTCTTCTATGACATCGAGATGGATGAAGATAATAGAATTACTAGTGTGTTTTGTGCAGATGCTCGAAGCCGAGCTGCATGTGACGAGTTCGGTGATGTCGTGTCGTTTGACACCACGTACTTAACAAACAAGTACGACATGCCATTTGCTCCATTTGTAGGAGTTAATCACCATGGACAATCGCTCTTACTTGGTTGTGGATTGCTGTCATCAGAGGACACTTAG 843 0.3938 MVLVDEMNEELNTDEESSLRLDPTLDMSFDTMQDAKKFYQDYGRRCGFGIQTRTSKKDSNNVVYYLRLVCSREGKYVSNIRLEVKTLPSQTNQCHAGITIARKNHKWFVRTVVLDHSHELCPQTSNLICGNRQLNMHAKHTLEVNDDAGVRINKSFLSIVSEAGGYENMQFVERDARNYIGQHMCKEGDGQALLRHFSKMRDQNNEFFYDIEMDEDNRITSVFCADARSRAACDEFGDVVSFDTTYLTNKYDMPFAPFVGVNHHGQSLLLGCGLLSSEDT* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0486 280 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 10 280 IPR031052 GO:0006355
Vra8g0486 280 PANTHER OS03G0843700 PROTEIN 10 280 - -
Vra8g0486 280 Pfam MULE transposase domain 239 280 IPR018289 -
Vra8g0486 280 Pfam FAR1 DNA-binding domain 37 121 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0486 Vra-Chr8 6617453 6618295 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vra8g0486 FAR1 4e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0486 - - vra:106759276 441.425