Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0470 ATGAATGGGGAGATGAAGTTTGAGGAGGAGCAGAGTAGATACATAAAACCCTCCATAGCCACACCACCACACCTTCAAACCTTCAAACTCTCTTTACTTGACCAGCTTTTCCCAAACATCCATGGAAACATCACCTTCTTTTACCCTCACACCACCCACACACTTCCGCACTTCTCCACCAAATCCCAACTCCTTCAAACCTCACTCTCCCACACCTTGATCCGCTTCTATCCTCTCGCCGGAAACCTCCATGATGCCACCACCCTCCACTGCAACGACGCTGGTGCCCTCTTCATCCAATCCCAGACCAATGTCTCTCTCTCCGACATCCTCAAAGCTCCCAGCTTCAACACCCTCCAATGTCTCCTCCCATCCCCCGATAACCAAGTCTCAACAAACGCGCCCATGCTCCTCGTACGCTTCACTTCCTTTAGCTGCGGCGGCACCGCCGTAACCATTTCTCTCTCCCACAAAATCGCCGACATGGCAGCCGTCATCGCACTCCTCAAAACTTGGACCGCTGCCTGCGCCGGAGAAACCCCTACGAGGGACCCCGAACTCGCCGCCGGCGCCGCGCTCTTTCCTCCGAGAGAGCTTCCCGCCGTGACGGCATCCGTAAACACCGCGTCGTCGGAGAATTTCACGTCGAGGAGATTCGTTTTCGAAGCGTCCAAGGTGAAAGCGCTAAAGAAGAGAATAGGAGAAGGTTGCGCGTTTGAACCTTCGAGGGTGGAGGTGGTGCTGGCGCTCATATGGAAATGCGCTCTCTCGGCTTCTCCCCCGGAAACGGCGTCGTTTAAGCATTCGGTTTTGTTCCAAGCGGTGAACCTCCGTCCCCGGGTGGAGCCAGCGGTGGCGGACGGAGCCTTGGGGAACTTTGTATGGCCATTCGCGGTGACGGTGGAGGAGGAGGAGCACTTGGAGTTGCAGGTGATGGTGAAGAGGATGAGGGAGAGTATGAAGGAGTTTGTGGAAAGTAAGGCAAAGAGGTTGAAAGAGGATGGTGGTTTTGAAGTATTTATGCAGAGTCTGAAGGAGAGAGGTGAAATTTTGAAGCAGAAGAGCGTTGTTTATAAGTGTTCGAGTTGGTGCAAGTTTCCAGTGGCTGAGGTTGATTTTGGTTGGGGCGAAGCTGTATGGGCTTGCAGTGTGAATAAGATTGCTAGTAACACCATTGCTTTGATGGATACAAGGGACGGTGGTGTTGAAGCTTTCGTCACCCTCGATCACAGACACATGCTTCTCTTTCAACAACATCACCTTCTTCTACACTATGCTTTGCTTAATCCCTCTGTTATGCTCTGA 1305 0.5257 MNGEMKFEEEQSRYIKPSIATPPHLQTFKLSLLDQLFPNIHGNITFFYPHTTHTLPHFSTKSQLLQTSLSHTLIRFYPLAGNLHDATTLHCNDAGALFIQSQTNVSLSDILKAPSFNTLQCLLPSPDNQVSTNAPMLLVRFTSFSCGGTAVTISLSHKIADMAAVIALLKTWTAACAGETPTRDPELAAGAALFPPRELPAVTASVNTASSENFTSRRFVFEASKVKALKKRIGEGCAFEPSRVEVVLALIWKCALSASPPETASFKHSVLFQAVNLRPRVEPAVADGALGNFVWPFAVTVEEEEHLELQVMVKRMRESMKEFVESKAKRLKEDGGFEVFMQSLKERGEILKQKSVVYKCSSWCKFPVAEVDFGWGEAVWACSVNKIASNTIALMDTRDGGVEAFVTLDHRHMLLFQQHHLLLHYALLNPSVML* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0470 434 Gene3D - 5 202 IPR023213 -
Vra8g0470 434 Pfam Transferase family 7 420 - -
Vra8g0470 434 Gene3D - 211 424 IPR023213 -
Vra8g0470 434 PANTHER F21J9.9 4 433 - -
Vra8g0470 434 PANTHER VINORINE SYNTHASE-RELATED 4 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0470 Vra-Chr8 6403749 6405816 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0470 5 418 Monolignol Biosynthesis Gene Families AT5G48930 23.725 5.13e-26 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0470 - - gmx:100808502 593.964