Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0459 ATGCCAGGCATTCCTGTTGCCGCTCGTGCAACCTCGAGCCACCATGATGCCTGTGAACATTTATCTGCGGAAGAAGAGCTTGCAGCTGAAGAGAGTCTTTCAATTTATTGCAAGCCCGTAGAATTTTACAATATTCTCCAGCGACGTGCCATGAGAAATCCATTATTTCTTCAGAGATGTTTGCACTACCAGATAAAGGAAAAACACAAGAAAAGAATACAAATGACAGTTTCCTTGATGCGGACTATTACGGAAAGTCAAAATGTGTTTCCCATGTCTATCTGTCTCGCAAGGCGGGTTTCTGATTATGGATCTTCAAGGCAATCTGCCGTGTATCGAATCGGTCGAATGTTCATCTTTCGAAACTCCCCTGGAATTGATTTAAATACTCAAGTCCAAGCAAATTTTACTCTTCCTGAAGTCAACAAGTTAGCTGATGAAGCTAGATCTTGCTCACTTGATATCTTGTTTGTCAGCACTGCCACTGCTGGAGAGTACTGCCTTTGGGGGAAAGTGTCTTTAGAATCACTTTATATGGCTTGGGATTGTTTTCCGAATTTTCGTTTAGGACAGCGAGCAGAGATTATGTCAACTGTTGATTTGCTTCCATGTATTCTGAAGTCAGATTTTAAAAACGACGACACAAGAGTATCTATTCAAGTTCCTTCTAATTTCGAGAATATGAGTGCATCAAAACAAGTACAAATCACAATTTCTGCGGAAGAGTTTGGGGCCAAAGAAAAATCTCCCTGTATTTCATACACAGGCAGTGAAGTACCATCCTCATCATTGTCTCACTTGATTGGATTGAGGGAAGGAAATGTCATGTTTAATTACAGGTATTACAATAATAAGTTACAGAGGACAGAAGTCACCGAAGATTTCACTTGTCCATTCTGTTTGGTTAAATGTTCTAGTTTTAAGGGTCTAAGATGTCATTTGTCCTCGTCACATGATCTCTTCAACTTTGAATTTTGGGTATCGGATGAGTGTCATGCTGTAAATGTGACTGTGAAGAATGATATCTCGAGATCAGAGATTGTTGCTGATACTGTTGATCCAAGAGTGCAAACATTTTTCTATTGTGGAAAGCCCCTTAAGCGTAGGACACCAAAGGACCTATCTTCTAAAAATGCAGTAGGCTTAGGGTCCGCCTTTCCTGCAGGAGAGACTGATATTTTGGAGAAGGATGATGGAATTTCTGCCACAATTATTAGATCACATCCTGATCGAGACTCTGTCCAGTCAATATCAGACTGTGATCAATCAGTGCTACAGTTTGCCAAGACTAGGAAGTTGTCAATTGAGTGTTCTGACTCACGAAACAGTGCCCTCTTAAGGAAACGACAGTTTTTTCATTCTCACAAAGCTCAGCCAATGACAATTGAACAAGTTCTATCAGATAAAGATAGCGAAGATGAAGTGGATGATGATGTCGCTGATTTTGAAGATAGAAGGATGCTTGAAAATTTTGTTGACGTGAGCAAGGATGAGAAGAATTTGATGCACATGTGGAACTCGTTTGTTCGGAAGCATCGTGTGATTGCAGATGGTCACATTTCATGGGCATGTGAGGCTTTCTCGAAATTGCATGCAGCTGAGTTTGTTGAGTCACGCTCACTGGCAGGGTGTTGGAGAATATTTATGGTGAAATTATACAATCATGGTCTTCTAGATGCTCGAACCATGAATGACTGTAATATTATTCTTGAGCAACAGCATAAGCAGAATTCAGAGCCCATTAGCTAA 1749 0.4054 MPGIPVAARATSSHHDACEHLSAEEELAAEESLSIYCKPVEFYNILQRRAMRNPLFLQRCLHYQIKEKHKKRIQMTVSLMRTITESQNVFPMSICLARRVSDYGSSRQSAVYRIGRMFIFRNSPGIDLNTQVQANFTLPEVNKLADEARSCSLDILFVSTATAGEYCLWGKVSLESLYMAWDCFPNFRLGQRAEIMSTVDLLPCILKSDFKNDDTRVSIQVPSNFENMSASKQVQITISAEEFGAKEKSPCISYTGSEVPSSSLSHLIGLREGNVMFNYRYYNNKLQRTEVTEDFTCPFCLVKCSSFKGLRCHLSSSHDLFNFEFWVSDECHAVNVTVKNDISRSEIVADTVDPRVQTFFYCGKPLKRRTPKDLSSKNAVGLGSAFPAGETDILEKDDGISATIIRSHPDRDSVQSISDCDQSVLQFAKTRKLSIECSDSRNSALLRKRQFFHSHKAQPMTIEQVLSDKDSEDEVDDDVADFEDRRMLENFVDVSKDEKNLMHMWNSFVRKHRVIADGHISWACEAFSKLHAAEFVESRSLAGCWRIFMVKLYNHGLLDARTMNDCNIILEQQHKQNSEPIS* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0459 582 Pfam VEFS-Box of polycomb protein 433 568 IPR019135 -
Vra8g0459 582 PANTHER POLYCOMB GROUP PROTEIN 14 580 - -
Vra8g0459 582 PANTHER POLYCOMB GROUP PROTEIN EMBRYONIC FLOWER 2-RELATED 14 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0459 Vra-Chr8 6190926 6215689 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0459 1 572 C2H2 Transcription Factor Family AT5G51230 53.397 0.0 601
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0459 - - gmx:100798991 1027.31