Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0453 ATGGCATCAAGCTCAATGTCAGCTACAGGATCATGGAGTGCTAAGGACAACAAGGCCTTTGAAAGGGCTCTAGCTGTTTATGACAAGGACACCCCTGACCGATGGAACAATGTTGCCCTTGCTGTTGGAGGGAAAACTCCTGATGAAGTGAAAAGGCACTATGAGCTACTCCTCAGAGACATTACTCAAATTGAATCGGGCCAAGTTCCTTTCCCAAACTACAAGAAAACTGCTGAATCTGATGAAGAGGGGAAAAGGCTGAAAAACATGGAGCTCCAGTGA 282 0.461 MASSSMSATGSWSAKDNKAFERALAVYDKDTPDRWNNVALAVGGKTPDEVKRHYELLLRDITQIESGQVPFPNYKKTAESDEEGKRLKNMELQ* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0453 93 ProSiteProfiles Myb-like domain profile. 4 58 IPR001005 -
Vra8g0453 93 CDD SANT 11 58 IPR001005 -
Vra8g0453 93 Gene3D - 2 71 - -
Vra8g0453 93 ProSiteProfiles SANT domain profile. 7 62 IPR017884 -
Vra8g0453 93 MobiDBLite consensus disorder prediction 76 93 - -
Vra8g0453 93 Pfam Myb-like DNA-binding domain 9 55 IPR001005 -
Vra8g0453 93 SUPERFAMILY Homeodomain-like 11 65 IPR009057 -
Vra8g0453 93 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 93 IPR044636 GO:0003700
Vra8g0453 93 MobiDBLite consensus disorder prediction 71 93 - -
Vra8g0453 93 PANTHER TRANSCRIPTION FACTOR MYB/SANT FAMILY-RELATED 1 93 - -
Vra8g0453 93 SMART sant 8 60 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0453 Vra-Chr8 6088551 6090055 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vra8g0453 Myb_DNA-binding 8.2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0453 - - gmx:100777923 162.155