Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0452 ATGAAGAACTCTGGTTTGGAAAGTGGAATGTTCATTGACAGTGATGAAGATGTGGAGAATGATCAGCATAAATATTTGAATGATGGAAACGATTCGGATTGTTCGAATTACTCCAATGAAAACCATTCAATGAGGAAACCCAGCAACTTCAACATGGCATGGCCTCAAAGTTACAGGCAATCCATTGATCTATATGGTAGTGTACCATCACCAAATATTGGATTTCTGGGGACCACATCCCTGTCAAGATTAGGAAGTTCTTTTATTTCTTCATCTTTGACAAAGAGGCAAACTCTTGAAATATTACAACCAGAGAAAAAACCACTCTTGCAACCCACAGAAGAGGAGCAACTGCGACATACCTTGCTTCCTTCACAGCTATCTAGAAAGTCTTCCATTAGGAAAGATCCTTCCAAGGTTTCTCATGAAGTTCACATACCTGGCCAATGCACTTTTGGACAAGCTGTGCTTAATGGCATAAATGCCCTTTGTGGAATAGGAATCCTTTCAACCCCTTATGCTGTTAAAGAAGGTGGATGGGTTGGTCTTTCTATATTGTTATTGTATGCACTTTTTTCCTATTACACTGGTTTGCTTCTGCGTTACTGCTTGGATAGTTCACCTGGTCTTGAGACATACCCTGACATTGGCCAAGCAGCTTTTGGTACTATTGGACGTGTCATCATATCTATAATATTATACATGGAACTATATGCTTGTTGCATTGAGTACATAATTGTGGAGAGTGACAACTTATCGACATTATTTCCAAATGCACACATTACTTTGGGTGGAATTGAAGTGAATGCACACATATTGTTTGCAATATTGACAGCTTTGGCTCTTCTTCCTACTGTTTGGCTTCGTGATCTACGCATTCTCAGTTACATCTCAGCTTGTGGAGTTATTGCAACGGTTCTAGTGGTTGTATGCTTGATCTGGGTTTGCTTGGTAGACAAAGCTGCCATTGATCATAGCCAAGGAACAACGACCTTGAATCTCGCAACTTTTCCTGTTGCAATGGGTCTTTATGGTTACTGCTACGCAGGACATGCTGTGTTTCCAAATCTCTACACTGCCATGGCAAATCGGAATCAATTTCCTGGAGTGCTCTTAGTATGTTTTGCTATTTGTACAAGTCTGTATTGTGCAGTAGCTGTTGTTGGTTACTCAGCATTTGGAGAAGGAATACATTCTCAGTTCACTCTTAACATGCCCCAACACTTAGTAGCTGCCAAGATAGCTGTGTGGACTACGGTGGTCAATCCATTTACCAAATATGCATTGAGTCTATCTCCAGTAGCAATGTGTTTAGAGGAATTGATACCACCAAACCACCCCAGCTTCAACATATATTCCAAGCTCATTAGAACAGCTCTTGTACTTTCTACACTAGCCGTTGGTCTTTCAGTTCCCTTTTTTGGTTTGGTAATGTCATTAACTGGATCTTTACTCACTATGTTTGTTTCATTGATTCTTCCTGCTGCTTGTTTTCTAAGCATAAGGAGTGGCAGAATCTCAAGCTTTCAGGTAGCACTTTGTGTTACAATTATTATTGTAGGTGTTGTATCAAGCTGTTTTGGATCATACTCATCCCTCGCTGAGATCATTGAGAAATTGTTTGGATAA 1629 0.4015 MKNSGLESGMFIDSDEDVENDQHKYLNDGNDSDCSNYSNENHSMRKPSNFNMAWPQSYRQSIDLYGSVPSPNIGFLGTTSLSRLGSSFISSSLTKRQTLEILQPEKKPLLQPTEEEQLRHTLLPSQLSRKSSIRKDPSKVSHEVHIPGQCTFGQAVLNGINALCGIGILSTPYAVKEGGWVGLSILLLYALFSYYTGLLLRYCLDSSPGLETYPDIGQAAFGTIGRVIISIILYMELYACCIEYIIVESDNLSTLFPNAHITLGGIEVNAHILFAILTALALLPTVWLRDLRILSYISACGVIATVLVVVCLIWVCLVDKAAIDHSQGTTTLNLATFPVAMGLYGYCYAGHAVFPNLYTAMANRNQFPGVLLVCFAICTSLYCAVAVVGYSAFGEGIHSQFTLNMPQHLVAAKIAVWTTVVNPFTKYALSLSPVAMCLEELIPPNHPSFNIYSKLIRTALVLSTLAVGLSVPFFGLVMSLTGSLLTMFVSLILPAACFLSIRSGRISSFQVALCVTIIIVGVVSSCFGSYSSLAEIIEKLFG* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0452 542 PANTHER OS05G0424000 PROTEIN-RELATED 22 539 - -
Vra8g0452 542 Pfam Transmembrane amino acid transporter protein 150 531 IPR013057 -
Vra8g0452 542 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 22 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0452 Vra-Chr8 6078697 6088468 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0452 7 475 Amino Acid or Auxin Permease AAAP Family AT2G39130 61.538 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0452 K15015 - gmx:100798108 888.256