Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0425 ATGGGAAAGTCCGGAGAGGAAGACCACCCTCTACCGTCCACCGTCGCCGCCGAGGACCCATGGCGGAATGCAGTGGCGGCGGGCTGCGTCTCTGTCGTTCGAATCAAATGCGTTATTGTCTTGCTTTTCTCACTCGCAGTTTTTCTATCCGCACTCTTGTGGTTACCACCATTCGTTCACTTCGCAGATCCCAAGGATCTGCATTTAAATTCTAATTTCAAAGATCATGATATCGTTGCAAGCTTTTATCTGCAGAAGCCAGTTTCTGTGGTAAAAGACAATATGTTGCAGCTTTCTGATGACATTTTCGAAGAGATAGGGGTTCCCTCAACCAAAGTGGTCATCTTGTCAGTGGATCTCTTACGAAGATCAAACATGACAAAAGTCGTGTTTGCAGTTGATCCTGATGGTAAATATTCTGAAATGTCTGCAGCTGCCATTAGTTTGATAAGAGCATCATTTAAATACTTTGTTATACGCCAATCATATCTCCTGGTCACCACATCCTTATTTGGTGTACCCTCCGTTTTTGAGGTGCTGAAATTTAAGGGAGGGATCACTATCATTCCACAACAAAGTGTGTTTCCTCTGCAAACAGTGCAAACACTATTCAACTTTACTTTGAATTTCTCCATTTACGAAATACAAACAGATTTTGGTGAGCTGACTAGTCAGCTAAAGGCTGGGCTACATTTGGCTCCTTATGAGAACTTGTATGTCATCTTATCAAATTCTGAAGGTTCTACATTAGCTGCTCCTACCACAGTTCAAACGTCTGTCCTACTTGCAGTTGGGGTGACGCCGTCAAAGGAGAGGCTAAAGCAACTGGCACAAACCATAATGGGACATCATTCATGGAACCTTGGGTTGAATAACACACAATTTGGTAGGGTTAAGCAGGTTCGACTATCATCCATCTTGCAACACTCCCTTCATGGCACCAGCAGTGGTGGCTCCGCTCAGTCACCTTCCCCTGCCCCTCTACCTGTCCATCACCACCATCACCATCACCACCATCATCACCATCATCACCATCACCACCATAGTCACCACCATAATGTGCATGATTTTCCTGAAACTTCACCTTCACCAATACCTACAACTGGGGAAGGTGCTGCTTCACCTGAATTTGGTTCTCCAGCCCCTGCAAGAAGTCTGCCTGACCCAGGAAGACATTCTTATGCTAAACCTCCAAAATGTCATTCCGGGTATAGAAAGAGATCTAGCCGGAATACTCAAAAACAATTTCATCCAACACCTGCAGTTGCTCCTACTAATGCCCCACACTATCCTGTTCCGTCACCAAAGGATCGACCCTCAGAACATGGTTTTCATTTCTTAGTTCCTGCCTTAAGTCCTTTACCAAACATAGCATTTGCGCATATCGAGCCCCCTCCTAAGAACGAGCCATCTGCTGAACGTCCCAGCACACAATTTCATGGGCCATCGCACTCTTTATATTCTGCAGGTTGTGCTGGGACTATTAATTGGATACCATTAATGTTTTCAGTAATTTTATTACTTGTATAA 1530 0.4464 MGKSGEEDHPLPSTVAAEDPWRNAVAAGCVSVVRIKCVIVLLFSLAVFLSALLWLPPFVHFADPKDLHLNSNFKDHDIVASFYLQKPVSVVKDNMLQLSDDIFEEIGVPSTKVVILSVDLLRRSNMTKVVFAVDPDGKYSEMSAAAISLIRASFKYFVIRQSYLLVTTSLFGVPSVFEVLKFKGGITIIPQQSVFPLQTVQTLFNFTLNFSIYEIQTDFGELTSQLKAGLHLAPYENLYVILSNSEGSTLAAPTTVQTSVLLAVGVTPSKERLKQLAQTIMGHHSWNLGLNNTQFGRVKQVRLSSILQHSLHGTSSGGSAQSPSPAPLPVHHHHHHHHHHHHHHHHHHSHHHNVHDFPETSPSPIPTTGEGAASPEFGSPAPARSLPDPGRHSYAKPPKCHSGYRKRSSRNTQKQFHPTPAVAPTNAPHYPVPSPKDRPSEHGFHFLVPALSPLPNIAFAHIEPPPKNEPSAERPSTQFHGPSHSLYSAGCAGTINWIPLMFSVILLLV* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0425 509 MobiDBLite consensus disorder prediction 311 443 - -
Vra8g0425 509 MobiDBLite consensus disorder prediction 398 412 - -
Vra8g0425 509 MobiDBLite consensus disorder prediction 329 352 - -
Vra8g0425 509 PANTHER F20B24.21 8 506 - -
Vra8g0425 509 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 8 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0425 Vra-Chr8 5561748 5568872 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0425 1 508 C3H Transcription Factor Family AT3G10810 44.854 8.80e-90 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0425 - - gmx:100818532 716.072