Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0416 ATGGAATCTTTCAAACAGAGTGGTGGAAGTTTTGTGAACAATACCAAAGTATTCACTCTGCAAGTCCTTACAGGGCGTTGGTTCATGGCTTTTTCCTCATTCATGATCATGTCTGTGTCAGGAGCAAGCTACATGTTCAGTCTATATTCAAGGGAAATCAAATCAGTTTTAGGGTATGATCAATCTACCCTAAATCTGTTAAGCTTCTTCAAGGATTTGGGGTCCAACATAGGCATCATTTCAGGCCTAATCAATGAGGTCACACCCCCTTGGGTGGTGTTAACAATTGGTGGAGTTCTCAATTTTTTTGGCTATTTCATAATTTGGCTTGCAGTGACCAGAAAAATTGCCAGGCCCCAGGTGTGGAAAATGTGCTTATACATATTCATTGGAGCAAATTCTCACTGTTCCACCAACACTGGAGTCATTGTGACCAGTGTGAAGAACTTCCCAGGCACAAGGGGCATTGTCATTGGCCTTCTCAGTGGCTACCTTGGTTTGAGTGCAGCAATCATCACTCAGATATACTATGCCTTCTATGGAAATGACTCCAAGTCTCTGATTTTGCTTATGGCATGGCTACCAACTGCTGTAACTTTTGTTTTCTTGCCAGTCATCAGACACCACAAGGGAGTTCAACAGCCAAATGATTCCAAGGCTTTCTATAATTTCCTCTACACCACTTTAGTTCTTGCAGGTTTCCTCATGGTAGTCATCATACTGCAAAAAAGTTTCAACTTTACTAAGAGTGAGTACTATGTCACTACTATACTGATGCTTCTGTTGCTCATCCTTCCACTTGTTGTTGTTATGTTTGAAGAACAAAAGATAAGGAAGAGGAAACAAGAGGACAGCAACACTGAAAACCCTCCTAAGCCTTTGAATATACCAACAGAGATGCCAAATCCAATGAGTTCTGCAGAGGCTCCACAAAAGCAAGTTTCCTGTTGGAAAAGCATGTTCAGCCCACCAAGTAGAGGTGAAGATTATACAATACTTCAAGCCATTTTTAGCCTTGACATGGTGATTCTTTTCTTAGCAACAATCTGTGGACTTGGTGGCACACTCACTGTGGTAAACAACTTGAGCCAAATTGGTGCATCCTTAGGATATTCATCACACAGTGTTACAACATTTGTGTCCCTGATGGCTATTTGGATCTATATGGGTAAAATAGTGCAGGGTGTGATATCAGAAATTATCATAGCCAAATTAAAAGTTCCTAGGCCTATTTTGTTCACATCAATTCTTGTCATCCCTTGTATTGGTCACCTTCTGATTGCTTTCAATGTCCCTAATGGTCTGTATGCAGCCTCAATGATAATTGGATTCTGCTTTGGGGCAAATTGGCCACTACTATTTTCCATCATATCAGAACTTTTTGGTCTGAAATTTTACTCAACTCTGTACAATGTTGGGTCAGTGGCAAGTCCAATTGGGTCATACTTGTTCAGTGTAAGGGTTGCAGGGTATTTGTATGACAAGGAAGCCAGAAAGCAAATGACAGCATTAGGATTGAAGAGGAAAGCTGGGGAGGAATTGAATTGCTATGGAAGTGAGTGTTACAAAATGGCTTTCATTATAATCACTGCAGTGAGCCTGTTTGGAGCACTTGTGTCTCTCATCTTGGTGTATAGGACTAGAGAGTTTTATAAAGGTGACATATACAAGAAGTTCAGAGAAGAAGATGGAACTGCTGCAGCTGAAATTGGTCTGACTCAGAACAAGTTTGCAGAACAACCTGCTGCAAATGAAGGCTAG 1761 0.41 MESFKQSGGSFVNNTKVFTLQVLTGRWFMAFSSFMIMSVSGASYMFSLYSREIKSVLGYDQSTLNLLSFFKDLGSNIGIISGLINEVTPPWVVLTIGGVLNFFGYFIIWLAVTRKIARPQVWKMCLYIFIGANSHCSTNTGVIVTSVKNFPGTRGIVIGLLSGYLGLSAAIITQIYYAFYGNDSKSLILLMAWLPTAVTFVFLPVIRHHKGVQQPNDSKAFYNFLYTTLVLAGFLMVVIILQKSFNFTKSEYYVTTILMLLLLILPLVVVMFEEQKIRKRKQEDSNTENPPKPLNIPTEMPNPMSSAEAPQKQVSCWKSMFSPPSRGEDYTILQAIFSLDMVILFLATICGLGGTLTVVNNLSQIGASLGYSSHSVTTFVSLMAIWIYMGKIVQGVISEIIIAKLKVPRPILFTSILVIPCIGHLLIAFNVPNGLYAASMIIGFCFGANWPLLFSIISELFGLKFYSTLYNVGSVASPIGSYLFSVRVAGYLYDKEARKQMTALGLKRKAGEELNCYGSECYKMAFIIITAVSLFGALVSLILVYRTREFYKGDIYKKFREEDGTAAAEIGLTQNKFAEQPAANEG* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0416 586 MobiDBLite consensus disorder prediction 288 307 - -
Vra8g0416 586 CDD MFS_Mch1p_like 25 537 - -
Vra8g0416 586 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 7 579 - -
Vra8g0416 586 PANTHER MFS TRANSPORTER 7 579 - -
Vra8g0416 586 MobiDBLite consensus disorder prediction 280 307 - -
Vra8g0416 586 Pfam Nodulin-like 26 270 IPR010658 -
Vra8g0416 586 Gene3D MFS general substrate transporter like domains 334 552 IPR036259 -
Vra8g0416 586 SUPERFAMILY MFS general substrate transporter 21 213 IPR036259 -
Vra8g0416 586 SUPERFAMILY MFS general substrate transporter 230 549 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0416 Vra-Chr8 5441398 5443739 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0416 8 562 Nodulin-like Gene Family AT2G39210 61.376 0.0 717
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0416 - - gmx:100789645 972.23