Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0385 ATGGCTGACGTGAGAGAACTTGATTCAGTGAAGATAATAGAGCAGTGTGAAGTTTCTCCGCCACCAAATTCTCTTCCTTCAACCATTCTTCCCCTAACTTTCTTTGATATTCCATGGTTCTTCTGCAACTCCGTCCAACGTATCTTCTTCTATGAGTTTCCCCATCCCACTCAAAACTTCCTCCAAACAACACTTCCTATTCTCAAACACTCTCTTTCGCTCTCTCTCCAACACTTCTTCCCTTTTGCCTCCAATCTCATCGTTCCACCACAACTCCACCTCTCTCACATCCGTTACCTTCAAGGTGACTCTCTCTCCTTCACCGTTGCAGAGTCCACCGCAGACTTTACTCTCCTCACATCTCATTCTCCTCAAGACGTTCGAAACTGGCACCCTCTTATTCCCACCTTGCCTTCCCCACGTCTTGAGCAGGATGACATACGTGTGATGCCTCTCATGGCCATTCAAGTCACGCTTTTTCCAAACTCTGGCTTCAGCATCTGCCTTACCTTCAACCACATTGCTGGGGATGGTAAATCACTTCATCATTTCATCAAGTTTTGGGCTTCTCTTTGCAAGGCAAGAGGGGACTTCACTTCCGTTGAGACCTCCTTCTCTCTTCCATCACACCAGAGAGACAAAGTTAAAGACCCAAAGGGGCTTAAGTTCATTTACTTTCGAGAACTTGGACATTTTCTGTCGAAAAGAATGGAGTTCGCAGGGCCTGTGCGAGATGTTATCACTAACAGGGTTCGCTTCACTGTCCTACTCAGTCTTGAACAAGTTAGGAAACTAAAGAAATGGGTCTCTCTTAAAAGTGCCAGCAACTATTCGGGGTTATTACACATATCAACCTTTGTTGTGGCATGCTCTTTGATCTGGGTTTGCAAGAACAGGTCGGAAGAAAAAAAAGCCAGTTTTTCTGAAGAGTGTGATGAGCTTTGCCACTTAGTGTTTCTAGCAGATTGTCGTGAGCGTTCTGAATTTTCATTATCTTCAACGTACTTTGGAAATTGTTTAACCTCTTACAATGTGGCAATAAAGAGGAGTGAGTTAGTGGGAGAAGATGGGATCGTTGCTGCGGCAAATGCTATTGGAAAGGAAATTACAAATTTGAAGAGTGATCCTTTGAGAAAAGCTGAAACGTTTATCTCAGATTATAAAGAGGTCACGAAACCTGGTAAATCTGTGTTGGTTATTGCAGGTTCACCAAAATTGGGTGTGTACAAGACTGATTTTGGTTGGGGAAAGCCTAAGAAATGTGCAGCAGCTCATATTGAATCGTCAAGATCCGTTTCTCTTTCTGATTGCAGAGACGAAAACGCAGGAATTGAGAACAGTCTAAATATAGAAGAGATTTCGAGATTTACAGGAAAACCATGGAAGTTGTATACAGAAAACTTCTCCAGCCACAACTTCATAGGTTTAGCTTTTCCTGTCTCTGGAAGATTTTCCACATATCAAATTCTCCCTAGTTATTGGGGAAGTTGGAGAAGAAGAAACCATTGTGGCAGAGAAAGCCTCTGGCTACAACCCTTTTACCTACAGAGAGATCAATCAATTGCATTACTATATGCTTTTATTACTTATATACAATCCAGTCTTCCAAACCTCATCATCTTCAGCTCCTTCCACAACCAAATTCTCCACACTCAAAAATTAAACATTATTTCCTAA 1677 0.4228 MADVRELDSVKIIEQCEVSPPPNSLPSTILPLTFFDIPWFFCNSVQRIFFYEFPHPTQNFLQTTLPILKHSLSLSLQHFFPFASNLIVPPQLHLSHIRYLQGDSLSFTVAESTADFTLLTSHSPQDVRNWHPLIPTLPSPRLEQDDIRVMPLMAIQVTLFPNSGFSICLTFNHIAGDGKSLHHFIKFWASLCKARGDFTSVETSFSLPSHQRDKVKDPKGLKFIYFRELGHFLSKRMEFAGPVRDVITNRVRFTVLLSLEQVRKLKKWVSLKSASNYSGLLHISTFVVACSLIWVCKNRSEEKKASFSEECDELCHLVFLADCRERSEFSLSSTYFGNCLTSYNVAIKRSELVGEDGIVAAANAIGKEITNLKSDPLRKAETFISDYKEVTKPGKSVLVIAGSPKLGVYKTDFGWGKPKKCAAAHIESSRSVSLSDCRDENAGIENSLNIEEISRFTGKPWKLYTENFSSHNFIGLAFPVSGRFSTYQILPSYWGSWRRRNHCGRESLWLQPFYLQRDQSIALLYAFITYIQSSLPNLIIFSSFHNQILHTQKLNIIS* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0385 558 Pfam Transferase family 12 446 - -
Vra8g0385 558 Gene3D - 5 233 IPR023213 -
Vra8g0385 558 PANTHER COUMAROYL-COA:ANTHOCYANIDIN 3-O-GLUCOSIDE-6''-O-COUMAROYLTRANSFERASE 1-RELATED 10 452 - -
Vra8g0385 558 Gene3D - 248 458 IPR023213 -
Vra8g0385 558 PANTHER - 10 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0385 Vra-Chr8 4989655 4992476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0385 37 418 Monolignol Biosynthesis Gene Families AT5G48930 25.310 2.31e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0385 - - vra:106771201 1136.32