Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra8g0369 | ATGATGTTCATATTTTCAACGCTTTTGTCGATGAAGTTCCAACCCTTTTGGTTGCTTCTTCTAATGTTCTTTTCTGCATTTCCCCATTCTCATGCTTTCAATTCTTCTGGAATTGCTTCAGAAGCAAATGCTCTGCTGAAGTGGAAAGCCAGCCTTGACATGAAGAGTCAAGCTTCTCTCTCTTCATGGACTGCCAACACTTCTTGCAATTGGTTCGGAATTGCATGTGATCACTCCAATCATGTTTCCCAAATAAATCTTCAAAATATTGGATTGAGAGGTACGCTTGAAAACCTCAACTTCTCAATGCTTACAAACATTCACACTCTAAATGTAAGTAACAACTCCCTGAGCGGAAGTATTCCTCCTCAAATTGGAGTTCTGTCCAATCTAGTTGTTCTTGATTTGTCTGCTAATAAACTCTCTGGGATTATCCCTTCTGAAATAACACAGTTGATTAGCCTTCAAAAGTTGAACATGAGTGGTAATATTTTCAGTGAGTCCCTTCCCCAAGAAATAGGGAGATTGAGGGAGCTGAGAATGCTTCATGTTCCTTGGTGCAATCTCACAGGGGCAATCCCAATCTCTATAGAAAAGTTGAACAATTTGATTCATGTAGATGTAGGAGGCAACAACCTTTCTGGCAGCATTCCTCAGAGAATTTGGCACATGGACCTAAACCATTTGTCATTTGGAACTAATAAATTCCATGGTTCCATTCCCAAAGAAATTGTAAATATGAGGAACCTGGAGATTCTATATCTTGGGGAAAGTGGCCTTTCCGGCACCATGCCCCAAGAAATTGACATGCTGGGGAAACTAATACACCTGGTAATGAGCAGTTGTAATCTTACTGGATCCATACCTATTTCAATTGGAGCTTTGACTAATATATCAATTCTTAGCTTACAAAACAACCAACTTTCTGGTCACATTCCTGGTGAAATTGGTGCTTTGACCAATCTATCACTTCTCATCTTAAATGACAATCAACTTTCTGGTTTTATTCCTCATGAAATTGGATTTTTGAGAAAACTCACTGAACTTGATTTGTCTCAGAATTTTCTCTCTGGTAAAATCCCTTCCACAATTGGAAACTTGAGCAATCTAAGTTTTCTATACCTTTATGGCAACCAATTCTCTGGATTTATCCCGGATGAAATAGGAGATTTGCATTCCCTTCAAACAATCCAGTTGCTGGGCAATAATCTCTCTGGACCAATCCCTACTTCCATAGGTAACCTGGTCAATTTGGAATCCATTTTACTTGATCAAAACAACCTCTCTGGACCAATTCCTACTTCCATAGGTAACCTGGTCAATTTGGAATCCGTTTCTCTTTCTCAAAACAAACTTTTTGGATCCATTCCTTCCACTATTGGAAATTTGTCGAAGCTTCGTGAATTATTTTTACTTAACAATAATCTCAGTGGCAAGATTCCAATAGAAATGAACAGGATTATTGCTTTGGAAAGTTTGCAGCTGGCTGATAATAATTTTGTTGGCCATTTACCTCACAACATTTGTGTTGGTGGAAAGTTGGCAAAATTTTCCGCTAGCAATAACCATTTCACTGGCCACATTCCAGAGAGTTTGAAGAATTGCTCTAGCCTTATACGAGTGAGACTTCAGGAAAATCAACTAACTGGAAACATAACAGATGCTTTTGGTGTACTTCCAAACTTGGTTTACATCGAATTGAGTGAAAACAATTTTTATGGTCATCTTTCACCAAATTGGGGGAAGTTTCGTAGCCTCACAAGCCTCAAGATCTCTAACAATAACTTATCAGGTGTTATCCCACCAGAACTAAGCGAGGCAACCGAATTACGTGAACTTCATTTATCCTCAAATCATCTTACAGGAAGCATTCCACAAGATTTATCTAAATTGGTTTTCTTGTTTCGCCTATCACTCGACAACAATAATCTTTCAGGAAATATTCCCTCAAAAATTGCATCAATGAAGAATCTTCAAATTTTGAGGCTTGGATCTAATAATTTGTCTGGGTTAATTCCAGACCAACTTGGAAATTTGTTCAGTTTATTGGAAATGAATTTGAGTCAGAACAAATTTGAGGGAAATATTCCCTTAGAGCTTGGCAAATTAATATCTCTTACGACTCTTGATCTCAGTGAAAATTTGTTGAGGGGAAGATTAACAAATGTGCTTGGAGGATTACAAAAATTAGAAACATTGAATCTCTCTCACAATAGTCTCTCAGGTGATCTTTCTAGCTTTGATGATATGATGAGCTTGACATCTATTGATATATCTTACAATGANTTTGANGGTCCACTTCCAAACATTCCAGTNTTTCGCAATGCTACAATGGANGCNNTAAGAAATAATAAAGGCTTGTGTGGCNANNTTAGTGGCTTNNAGCCTTGCCNAACANTANGTNGNAANTCNCANAANCANANGACAAAGAAAGTCATAANNNTNGTTNTACCCCTTACTTTGGGCANTCTANTNCTNGCATTNTTTNTTTTTGGAGTNTNNTATTATTTATGCAAAACTTCAGNGAAANTNGAAGANNAANCTACCAATTTNCAAACTNCAAACACATTTGCAATATGGAGTTTTGATGGCAAAATGGTATTNGAGAATATTGTTGAAGCCACTGAAAANTTTGACGATAAGCATCTCATTGGAGTTGGAGGNCAAGGACAAGTTTACAAAGCANTGTTANCCTCAGGTCAAGTTGTGGCTGTAAAGAAACTTCATTCAGTTCCAAATGGAGAAAAGCTCAATGTGAAAGCTTTCACAAGTGAGATCCAAGCTCTGACAGAAATTCGCCATCGTAACATTGTAAAGTTATATGGGTTTTGTTCACATTCCCAATGGTCATTTACGGTTTGTGAATTCTTGGAGAAGGGCAATGTCCAGAATATTTTGAAGGATGATGAAGAAGCAATTGCATTTGATTGGAATAAGAGAGTGAATGTTATTAAAGATGTAGCAAATGCTTTATTGTACATGCATTATGATTGCTCACCACCAATTATTCATCGTGATATATCAAGTAAAAATGTCCTTTTGGATTTGGAATATGTGGCACATGTCTCTGATTTCGGAACAGCCAAGTTTCTTAATCCCAATTCATCCAATTGGACCTCATTTGTAGGAACCTTCGGATATGCCGCTCCAGAACTTGCATACACAATGGAAGTGAATGAGAAATGTGACGTGTATAGTTTTGGAGTGTTGGCATGGGAAATACTTCTGGGAAAGCATCCTAGTGATTTTATATCTTCCTTATTATCATCTTCATCCACTGCTGATCATATGACATTGATGGATAAGTTGGAGCAGCGTCTCCCTCCTCCAACTAAACGTTTACTTAAAGAAGTGGCATCAGTGGCGAAAATAGCACTTGCTTGCATGACTGAAAGTCCACGATCACGCCCTACTATAAAGGAGGTTGTCAATGAGCTTGTAATGAGCTTGTAG | 3453 | 0.3727 | MMFIFSTLLSMKFQPFWLLLLMFFSAFPHSHAFNSSGIASEANALLKWKASLDMKSQASLSSWTANTSCNWFGIACDHSNHVSQINLQNIGLRGTLENLNFSMLTNIHTLNVSNNSLSGSIPPQIGVLSNLVVLDLSANKLSGIIPSEITQLISLQKLNMSGNIFSESLPQEIGRLRELRMLHVPWCNLTGAIPISIEKLNNLIHVDVGGNNLSGSIPQRIWHMDLNHLSFGTNKFHGSIPKEIVNMRNLEILYLGESGLSGTMPQEIDMLGKLIHLVMSSCNLTGSIPISIGALTNISILSLQNNQLSGHIPGEIGALTNLSLLILNDNQLSGFIPHEIGFLRKLTELDLSQNFLSGKIPSTIGNLSNLSFLYLYGNQFSGFIPDEIGDLHSLQTIQLLGNNLSGPIPTSIGNLVNLESILLDQNNLSGPIPTSIGNLVNLESVSLSQNKLFGSIPSTIGNLSKLRELFLLNNNLSGKIPIEMNRIIALESLQLADNNFVGHLPHNICVGGKLAKFSASNNHFTGHIPESLKNCSSLIRVRLQENQLTGNITDAFGVLPNLVYIELSENNFYGHLSPNWGKFRSLTSLKISNNNLSGVIPPELSEATELRELHLSSNHLTGSIPQDLSKLVFLFRLSLDNNNLSGNIPSKIASMKNLQILRLGSNNLSGLIPDQLGNLFSLLEMNLSQNKFEGNIPLELGKLISLTTLDLSENLLRGRLTNVLGGLQKLETLNLSHNSLSGDLSSFDDMMSLTSIDISYNXFXGPLPNIPVFRNATMXAXRNNKGLCGXXSGXXPCXTXXXXSXXXXTKKVIXXVXPLTLGXLXLAXFXFGVXYYLCKTSXKXEXXXTNXQTXNTFAIWSFDGKMVXENIVEATEXFDDKHLIGVGGQGQVYKAXLXSGQVVAVKKLHSVPNGEKLNVKAFTSEIQALTEIRHRNIVKLYGFCSHSQWSFTVCEFLEKGNVQNILKDDEEAIAFDWNKRVNVIKDVANALLYMHYDCSPPIIHRDISSKNVLLDLEYVAHVSDFGTAKFLNPNSSNWTSFVGTFGYAAPELAYTMEVNEKCDVYSFGVLAWEILLGKHPSDFISSLLSSSSTADHMTLMDKLEQRLPPPTKRLLKEVASVAKIALACMTESPRSRPTIKEVVNELVMSL* | 1151 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra8g0369 | 1150 | Gene3D | Transferase(Phosphotransferase) domain 1 | 957 | 1149 | - | - | |
Vra8g0369 | 1150 | ProSitePatterns | Tyrosine protein kinases specific active-site signature. | 1002 | 1014 | IPR008266 | GO:0004672|GO:0006468 | |
Vra8g0369 | 1150 | ProSiteProfiles | Leucine-rich repeat profile. | 729 | 751 | IPR001611 | GO:0005515 | |
Vra8g0369 | 1150 | ProSiteProfiles | Leucine-rich repeat profile. | 609 | 632 | IPR001611 | GO:0005515 | |
Vra8g0369 | 1150 | Pfam | Leucine rich repeat N-terminal domain | 39 | 77 | IPR013210 | - | |
Vra8g0369 | 1150 | Pfam | Leucine rich repeat | 344 | 404 | IPR001611 | GO:0005515 | |
Vra8g0369 | 1150 | Pfam | Leucine rich repeat | 106 | 163 | IPR001611 | GO:0005515 | |
Vra8g0369 | 1150 | Pfam | Leucine rich repeat | 705 | 762 | IPR001611 | GO:0005515 | |
Vra8g0369 | 1150 | Gene3D | Phosphorylase Kinase; domain 1 | 840 | 956 | - | - | |
Vra8g0369 | 1150 | Gene3D | Ribonuclease Inhibitor | 487 | 797 | IPR032675 | - | |
Vra8g0369 | 1150 | SUPERFAMILY | Protein kinase-like (PK-like) | 863 | 1146 | IPR011009 | - | |
Vra8g0369 | 1150 | PANTHER | LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED | 180 | 313 | - | - | |
Vra8g0369 | 1150 | PANTHER | LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED | 274 | 385 | - | - | |
Vra8g0369 | 1150 | PANTHER | LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED | 9 | 180 | - | - | |
Vra8g0369 | 1150 | PANTHER | LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED | 370 | 1149 | - | - | |
Vra8g0369 | 1150 | SUPERFAMILY | L domain-like | 567 | 790 | - | - | |
Vra8g0369 | 1150 | SUPERFAMILY | L domain-like | 316 | 622 | - | - | |
Vra8g0369 | 1150 | ProSiteProfiles | Protein kinase domain profile. | 878 | 1148 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vra8g0369 | 1150 | SUPERFAMILY | L domain-like | 40 | 310 | - | - | |
Vra8g0369 | 1150 | Pfam | Leucine Rich Repeat | 610 | 631 | IPR001611 | GO:0005515 | |
Vra8g0369 | 1150 | SMART | LRR_typ_2 | 655 | 678 | IPR003591 | - | |
Vra8g0369 | 1150 | SMART | LRR_typ_2 | 128 | 151 | IPR003591 | - | |
Vra8g0369 | 1150 | SMART | LRR_typ_2 | 583 | 607 | IPR003591 | - | |
Vra8g0369 | 1150 | SMART | LRR_typ_2 | 295 | 319 | IPR003591 | - | |
Vra8g0369 | 1150 | SMART | LRR_typ_2 | 487 | 511 | IPR003591 | - | |
Vra8g0369 | 1150 | SMART | LRR_typ_2 | 104 | 126 | IPR003591 | - | |
Vra8g0369 | 1150 | SMART | LRR_typ_2 | 727 | 749 | IPR003591 | - | |
Vra8g0369 | 1150 | SMART | LRR_typ_2 | 608 | 631 | IPR003591 | - | |
Vra8g0369 | 1150 | SMART | LRR_typ_2 | 703 | 726 | IPR003591 | - | |
Vra8g0369 | 1150 | SMART | LRR_typ_2 | 367 | 391 | IPR003591 | - | |
Vra8g0369 | 1150 | SMART | LRR_typ_2 | 200 | 224 | IPR003591 | - | |
Vra8g0369 | 1150 | SMART | LRR_typ_2 | 152 | 176 | IPR003591 | - | |
Vra8g0369 | 1150 | SMART | LRR_typ_2 | 439 | 463 | IPR003591 | - | |
Vra8g0369 | 1150 | SMART | LRR_typ_2 | 343 | 366 | IPR003591 | - | |
Vra8g0369 | 1150 | PANTHER | LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN | 9 | 180 | - | - | |
Vra8g0369 | 1150 | PANTHER | LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN | 274 | 385 | - | - | |
Vra8g0369 | 1150 | PANTHER | LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN | 370 | 1149 | - | - | |
Vra8g0369 | 1150 | PANTHER | LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN | 180 | 313 | - | - | |
Vra8g0369 | 1150 | Gene3D | Ribonuclease Inhibitor | 384 | 486 | IPR032675 | - | |
Vra8g0369 | 1150 | Gene3D | Ribonuclease Inhibitor | 271 | 383 | IPR032675 | - | |
Vra8g0369 | 1150 | Pfam | Protein kinase domain | 879 | 1145 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vra8g0369 | 1150 | PRINTS | Leucine-rich repeat signature | 131 | 144 | - | - | |
Vra8g0369 | 1150 | PRINTS | Leucine-rich repeat signature | 727 | 740 | - | - | |
Vra8g0369 | 1150 | SMART | LRR_sd22_2 | 727 | 746 | - | - | |
Vra8g0369 | 1150 | SMART | LRR_sd22_2 | 295 | 324 | - | - | |
Vra8g0369 | 1150 | SMART | LRR_sd22_2 | 439 | 465 | - | - | |
Vra8g0369 | 1150 | SMART | LRR_sd22_2 | 343 | 369 | - | - | |
Vra8g0369 | 1150 | SMART | LRR_sd22_2 | 128 | 157 | - | - | |
Vra8g0369 | 1150 | Gene3D | Ribonuclease Inhibitor | 40 | 152 | IPR032675 | - | |
Vra8g0369 | 1150 | Gene3D | Ribonuclease Inhibitor | 225 | 270 | IPR032675 | - | |
Vra8g0369 | 1150 | Gene3D | Ribonuclease Inhibitor | 153 | 224 | IPR032675 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra8g0369 | Vra-Chr8 | 4759535 | 4763257 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra8g0369 | 5 | 695 | Receptor kinase-like Gene Family | AT4G08850 | 34.290 | 4.34e-103 | 347 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Vra8g0369 | Pkinase | 1.5e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra8g0369 | - | - | vra:106770104 | 2149.01 |