Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0344 ATGGCGACTGAAACTGACTCAAGAGACAGCGCTCTCACTTTGCTCAAACAAGGAGCGGAGGCTAGGGTTTTTGAGTCTTCATTTGTGGGAAAGAGATGTGTTGTCAAGGAGCGCTTCTCAAAGAAGTACAGGCATCCAACTTTGGATTCTAAATTGACACTGAAGCGCTTAAATGCGGAGGCGAGGTGCGTGACCAAAGCAAGGAAACTTGGGGTTTGTACTCCTGTGCTGTATGCTGTGGATCCTGCGTTGCACACTTTAACGTTTGAGTATGTTGAGGACCCTTCAGTCAAGGATGTATTTCTTGAATTTGGTTCTCGTGGCCTTGGTGAAGAGGGTCTGGACAACATTGCTACCCAAATTGGTCATGCAATTGGAAAACTGCATGATGGTGGTCTTGTTCATGGTGATTTAACAACATCAAACATGTTGCTCAAGAGTGGTACCAATGAGTTGGTTCTTATTGATTTTGGTTTGAGCTTCACTTCAACTCTACCGGAAGATAAAGCAGTTGATTTGTATGTTCTGGAAAGAGCTATTCTGTCAATGCATTCTTCATGTGGGAATGTGATGGATCGGATACTTACTGCATACCGGAAGTCATCAAAACAGTGGTCATCCACATTGAACAAGTTGGCACAAGTGAGGCAAAGAGGACGAAAGAGGACCATGGTTGGATGA 681 0.4435 MATETDSRDSALTLLKQGAEARVFESSFVGKRCVVKERFSKKYRHPTLDSKLTLKRLNAEARCVTKARKLGVCTPVLYAVDPALHTLTFEYVEDPSVKDVFLEFGSRGLGEEGLDNIATQIGHAIGKLHDGGLVHGDLTTSNMLLKSGTNELVLIDFGLSFTSTLPEDKAVDLYVLERAILSMHSSCGNVMDRILTAYRKSSKQWSSTLNKLAQVRQRGRKRTMVG* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0344 226 CDD PKc 17 160 - -
Vra8g0344 226 ProSiteProfiles Protein kinase domain profile. 9 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra8g0344 226 PANTHER EKC/KEOPS COMPLEX SUBUNIT BUD32-LIKE ISOFORM X1 1 226 - -
Vra8g0344 226 SMART serkin_6 9 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra8g0344 226 ProSitePatterns Tyrosine protein kinases specific active-site signature. 133 145 IPR008266 GO:0004672|GO:0006468
Vra8g0344 226 PANTHER O-SIALOGLYCOPROTEIN ENDOPEPTIDASE 1 226 IPR022495 GO:0004674
Vra8g0344 226 TIGRFAM arch_bud32: Kae1-associated kinase Bud32 15 220 IPR022495 GO:0004674
Vra8g0344 226 Pfam Protein kinase domain 45 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra8g0344 226 Gene3D Transferase(Phosphotransferase) domain 1 109 223 - -
Vra8g0344 226 SUPERFAMILY Protein kinase-like (PK-like) 12 174 IPR011009 -
Vra8g0344 226 Gene3D Phosphorylase Kinase; domain 1 20 92 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Vra8g0344 Pkinase 1.1e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0344 K08851 - gmx:100782376 389.808