Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0339 ATGGCAAAGAGAAAGAGCTGGTTTGGATGGGTGAAAAGGCTATTCACTTCTGAGCCAAAGGACAACAAAAAGCCAAACAAATGGGGGTGGAGTTTTGGAAGGATCAAGCAGAGACAGTATCCTACAATTACAGCTCCAAATAAGACATTGATTGAAGCAAGTGCAGAACAGAGAAAACATGCTTTAACTGTGGCTATTGCAACTGCAGCAGCTGCTGAAGCTGCAGTTGCTGCTGCACATGCTGCTGCTGAGGTTGTCAAGCTCACAGGTGCTTCTCGTTCTTACTCATATCTTTCCAAGGGAGACAGAAGTTTAGCTGCCATCAAGATCCAAAGCGCATACCGTGCACATCTTGCTAGGAAAGCATTAAGAGCATTGAAGGGAGTTATAAGACTGCAAGCCATAATTCGTGGACAAGCTGTGAGACGTCGAATGTCAAACACTATACAGAATTTTCACTCCAATGCAAGAAATCAGGTGGAAATTCTGGAAAGAAGTAGCCATATGGCTGAACATACCAAGCAAAATCCTAAGCAAAAGAAAAAGTTAGAAGATAAGGAACTGAAGTCTGAATGCGATAGTCAAAGAACATGGGATTGTAGCTTGCTCTCTAGAGAAGACATTGAAGCTATATGGTACAGAAAACAAGAGGCCATGCTCAAAAGAGAGCGTATGAAACAGTACTCTTCTTCACAAAGGGAGAGAAAAAATCCAGAAATGGTGGAAGAATGTATGCAGAACATGAAGTTTGGAAGAGAGAGCTGTCGTACACTTGGAGAGTGGCTGCATAAAGAAACATGTGATTTGAATATGATGTATAAGCCAATGACTCTTCCTTCAAACTTGATGACAGCAAAACAAGAATGGCAAGAAGGATTGAGTCCACAGATTTCAATTCCAAGGAAATCATTTTCTGTTGTAAAAAGAAGTTTAAATGGGGATGAGAGTTCAATGTCAAATTCTCCAGTTTTTCCAACATACATGGCTGTTACTGAATCCAGCAAAGCAAAGATGAGATCTGTCAGCACACCAAAGCAAAGAACAGGAATTCTTGACATATGCTCCAATCACAATGAAGGAATTTCCTTTTACTCTTCTTGCTATGGTGAAACTAGCAGCACCAATCAAAGATGCTAA 1137 0.4081 MAKRKSWFGWVKRLFTSEPKDNKKPNKWGWSFGRIKQRQYPTITAPNKTLIEASAEQRKHALTVAIATAAAAEAAVAAAHAAAEVVKLTGASRSYSYLSKGDRSLAAIKIQSAYRAHLARKALRALKGVIRLQAIIRGQAVRRRMSNTIQNFHSNARNQVEILERSSHMAEHTKQNPKQKKKLEDKELKSECDSQRTWDCSLLSREDIEAIWYRKQEAMLKRERMKQYSSSQRERKNPEMVEECMQNMKFGRESCRTLGEWLHKETCDLNMMYKPMTLPSNLMTAKQEWQEGLSPQISIPRKSFSVVKRSLNGDESSMSNSPVFPTYMAVTESSKAKMRSVSTPKQRTGILDICSNHNEGISFYSSCYGETSSTNQRC* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0339 378 Pfam Protein of unknown function (DUF4005) 309 348 IPR025064 -
Vra8g0339 378 SMART iq_5 102 124 IPR000048 GO:0005515
Vra8g0339 378 PANTHER IQ-DOMAIN 5-RELATED 1 374 - -
Vra8g0339 378 ProSiteProfiles IQ motif profile. 127 154 IPR000048 GO:0005515
Vra8g0339 378 Pfam IQ calmodulin-binding motif 106 124 IPR000048 GO:0005515
Vra8g0339 378 PANTHER IQ-DOMAIN 12 1 374 - -
Vra8g0339 378 MobiDBLite consensus disorder prediction 167 188 - -
Vra8g0339 378 Gene3D - 102 151 - -
Vra8g0339 378 ProSiteProfiles IQ motif profile. 103 131 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0339 Vra-Chr8 4380993 4384550 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0339 1 375 IQD Protein Family AT5G03960 45.431 3.52e-79 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0339 - - gmx:100800767 551.206