Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra8g0337 | ATGGCTGATTACGACCTTACCCCGCGGATGGCGCCGAACCTCGACAGGCATTTGGTGTTCCCTCTCCTGGAGTTTCTGCAGGAGCGCCAGCTATACGACGATGACCTCATCCTCAAGGCGAAGATCGACCTCCTCAACAACACCAACATGGTTGATTACGCCATGGACATCCACAAGAGTCTCTACCACACCGAGGATGTTCCTCATGACATGGTTGAGCGCCGAGCCGAGGTTGTCGCCCGCCTCAAGTCCCTCGAGGAGGCCGCCGCGCCCCTCGTCTCCTTCCTCCAGAACGCTGCCGCCGTGCAGGAGCTACGTGCCGACAAGCAGTATAACCTCCAGATGCTCAATGAGCGATATCAGATTGGTCCTGCACAAATAGAGGCACTTTACCAATATGCCAAGTTTCAGTTTGAGTGTGGGAACTACTCTGGTGCTGCTGACTATCTTTATCAGTACAGAGCTTTGTGCACAAATAGTGAGAGGAGCTTGAGTGCATTGTGGGGGAAGCTGGCAGCTGAAATTTTGATGCAGAACTGGGACATTGCTCTTGAAGAGCTCAATCGCTTGAAGGAAATCATTGACTCAAAGAGTTTTGCATCACCTTTGAACCAGGTGCAGAGCAGAATATGGCTGATGCATTGGAGTCTGTTCATCTTTTTTAATCATGACAATGGAAGAACACAAATAATTGATCTGTTCAATCAGGATAAGTATCTAAATGCTATCCAAACCAGTGCCCCACACCTTTTACGATACCTGGCCACAGCATTCATTGTTAACAAGAGAAGGAGGCCACAATTCAAAGACTTTATTAAAGTTATTCAACAAGAGCAGCATTCGTATAAAGATCCCATCACTGAGTTTTTGGCTTGTGTTTACGTCAACTATGACTTTGATGGGGCACAAAAGAAGATGAGGGAATGTGAAGAAGTAATTCTCAATGATCCTTTCCTTGGTAAAAGGGTTGAAGAAAGCAACTTTTCAACTGTACCACTGAGGGATGAGTTCCTTGAAAATGCTAGGCTATTTATCTTTGAGACATACTGTAGAATACATCAACGTATTGACATGGGAGTGCTTGCTGAGAAGTTAAATTTGAATTATGAGGAGGCTGAGAGATGGATTGTTAATCTCATCCGTAGCTCAAAGCTTGATGCGAAAATTGACTCTCACACTGGAACAGTTATCATGGAGCCTAATCATCCAAACGTGTATGAGCAACTGATAGACCATACCAAGGCCCTTAACGGGCGCACCTACAAGTTGGTTAGTCAACTTCTGGAACATGCACAAGGTCAAGCAGCCCGATAA | 1314 | 0.4597 | MADYDLTPRMAPNLDRHLVFPLLEFLQERQLYDDDLILKAKIDLLNNTNMVDYAMDIHKSLYHTEDVPHDMVERRAEVVARLKSLEEAAAPLVSFLQNAAAVQELRADKQYNLQMLNERYQIGPAQIEALYQYAKFQFECGNYSGAADYLYQYRALCTNSERSLSALWGKLAAEILMQNWDIALEELNRLKEIIDSKSFASPLNQVQSRIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYLNAIQTSAPHLLRYLATAFIVNKRRRPQFKDFIKVIQQEQHSYKDPITEFLACVYVNYDFDGAQKKMRECEEVILNDPFLGKRVEESNFSTVPLRDEFLENARLFIFETYCRIHQRIDMGVLAEKLNLNYEEAERWIVNLIRSSKLDAKIDSHTGTVIMEPNHPNVYEQLIDHTKALNGRTYKLVSQLLEHAQGQAAR* | 438 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra8g0337 | 437 | Hamap | Eukaryotic translation initiation factor 3 subunit E [EIF3E]. | 2 | 429 | IPR016650 | GO:0003743|GO:0005737|GO:0005852 | |
Vra8g0337 | 437 | SMART | eIF3_N_2 | 5 | 137 | IPR019010 | - | |
Vra8g0337 | 437 | SMART | motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 | 332 | 416 | - | - | |
Vra8g0337 | 437 | Pfam | PCI domain | 285 | 399 | IPR000717 | - | |
Vra8g0337 | 437 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E | 1 | 434 | IPR016650 | GO:0003743|GO:0005737|GO:0005852 | |
Vra8g0337 | 437 | Pfam | eIF3 subunit 6 N terminal domain | 5 | 137 | IPR019010 | - | |
Vra8g0337 | 437 | PIRSF | Transl_init_eIF3e | 1 | 437 | IPR016650 | GO:0003743|GO:0005737|GO:0005852 | |
Vra8g0337 | 437 | Gene3D | - | 228 | 432 | - | - | |
Vra8g0337 | 437 | ProSiteProfiles | PCI domain profile. | 219 | 403 | IPR000717 | - | |
Vra8g0337 | 437 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E | 1 | 434 | - | - | |
Vra8g0337 | 437 | SUPERFAMILY | "Winged helix" DNA-binding domain | 332 | 403 | IPR036390 | - | |
Vra8g0337 | 437 | SMART | PINT_4 | 332 | 416 | IPR000717 | - |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra8g0337 | 3 | 437 | Eukaryotic Initiation Factors Gene Family | AT3G57290 | 87.816 | 0.0 | 807 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra8g0337 | K03250 | - | gmx:100797748 | 850.506 |