Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0335 ATGGCCGAAACACTTCTTTTCAGCTTCGCAGAATCACTCATAGGGAAGCTTGCCACTGCTGCCGTTCAAGAAGCTTCTTTGGCGCTTGGTGTACATAGCGAGCTACAGCAGATGAAAGCGACTATGGCACTCATCAAAGGTGTTCTGCTAGATGCTGAGAAAAAGAATCTGCGTAGCAGTGCGCTAAGTGAATGGCTGACTCAGATCAAGCGCGTGTTTTCTGATGCTGAAGACATAGTCGATGATTTTGAATGCGAAGCATTAAGGAAGCATGTTGTCAACACCTACGGTAGCTGCTCAAGAAAGGTACGCCGTTTTTTCTCGAAAAGTAATCCTGCTGTTTATCGTCTTAGAATGGCGCATCACATTCAAGACATCAACACCAGGTTGGCCAAACTTGCAACTGATAGGAACATGTTTGGCCTTCAAATCATTGACCATGATACACGTGTTGTTCACGTGAGGGAAATGACTCATTCTCATGTAAATCCTTCCAATGTTACAGGAAGGAAACATGATAAGAATGAAATAGTAAAACTTTTGGTGCAAGATAGTGAACGCCAAAGTCTTTCTGTTATTTCCATTGCGGGAATGGGAGGCTTGGGGAAAACCACACTTGCTAAGTTGGTCTTCAATGACACCAACATTGATGAATGTTTTCCGTTGAAGATGTGGGTTTGCGTCTCTAATGATTTTGAACTTAGGAATGTGCTCATTAAAATCCTCAATTCTGTTCCAAACCCAACTCAAGAAAACTCCAATAACTTTGGGATGGAGCAACTTCAAAACCTTCTGAGAAATAGACTTGAAGGTAAGAAGTTCTTGCTTGTGTTGGATGACGTGTGGAACGAGGATCCTGCACGATGGCATGAGTTGAAGGAAATAATAGACGTGGGTGTTGAAGGGAGTAAAGTCCTAGTGACCACTCGTAGCCATGGAGTAGCTGTCATAATGCGCACTAAACCATCACATTTGTACCTTCTTGGATGTCTCTCTGAAGAGGATTCTCTTTCTCTATTTGTGAAATATGCTTTTGATGATGGAGAAGAAAAAAAACATCCAGAACTGTTGAAGATTGGAAAAGAAATAGTAAAAAAATGTGGTGGGTTACCTTTAGCAGTGAAAACGGTTGGGAGTTCATTGTTTTCAAGGTTTGATAAGAAAGAGTGGGAGTCTATAAGAGACAATGAAATTTGGAATTTAACACAAATTGAAAATGACATTTTGCCTGCTCTCAAACTAAGTTACGATCAACTCCCTTCATATTTAAAACCTTGTTTTGCTTCTTTCTCCCTTTACCCTGAGGATACTGTTATTCGTTGTTCTGAAATTTCTACCATGTGGGAAGCACTTGGTTTTCTTCCGCCCCCAAAGGAAAGTGAATCAATGGTGGATGTTGCCAATCATCTTCTGTATGAGCTATGGTCAAGATCTTTTCTTTTAGATTATTTTGACTTCGGGGGCGATTCCGCATTTATGTTACATGATTTGGTGTATGATCTTGCTGTTCATATTGCAAAAGGTGAGTTTGAAAGAATTGATCTCCGCCATAAAAAATTTTCTGAGAATGTCAAACATTTAGCCTTTATGGAAAATAATTTGCTTGCTCAAGTTTTTCCTCACACAGGTTTAAGAAGTGTGTATCTTCCCCGGAGAATGAACAATGAAGCTTTCTTGATTACATTGTTGTCAAGATGCAAATACTTGAGGATTTTAGAATTACGTTCATCTGAATTGGAGAGTTTGCCTTACTTTATTGGAAAGTTGAAACATTTAAGACATCTTAATCTCCAGTTTAGTAAAAAACTCAAGAGACTCCCTGATTCAGTTTGTGAACTTCAAAATTTGCAAACTTTGAATCTCATTGGATGTGTAGAGCTACAAAAACTACCCAAAGGAATGAGAAATCTAATCAGCCTTCGGAATCTTCGCATAACCACCAAACAAGTTGATTTTCCAGACAAAGACATTGCAGTTTTGACTTCTTTAGAAGAGTTAAAAATTAAAGATTCTCATAATTTGGAGTCATTGTTCAATGGTATACAACTGTCCACTCTTAAAAAATTAGCCTTATATGGATGTAAAAGTCTAAAGTCGGTGTCGTTTCACGCCATTAGAAATATAAATGTTTTGGCTATCTGTAAGTGCGACAAGTTAGAATTGTCAATGGGTGTTGGAAGTCAAATCCCCAATTCAAGGTTAAAGCTTGTTTCTCTTGAAGACTTGCCGCAACTGGTCACGTTGCCTCAGTGGATTCAAGGATCTGGAAACTATTTACGAAGCTTATTTATTGTAGGTTGCATCAATCTTAAGGAGCTTCCCGATTGGCTACCAACTCTAGTTTATCTCAAACTTCTTTCTATTACAAATTGTCCAAATTTGTTGTCACTGCCTGATAACATGCATCAGCTGACAAATCTTGAATCATTAGAAATAACCAGTTGTCCTGAATTATGGAAAAGATTCAAGCCAGGAGTTGGACAAGATTGGTACAAGATATCACACATCAAAGATGTTTACAATCTTCAAGAGAAGAAAATGAAGAGGAAGACGAAGAAGAAGAATAAAACAATCCAAAGTTGA 2583 0.3848 MAETLLFSFAESLIGKLATAAVQEASLALGVHSELQQMKATMALIKGVLLDAEKKNLRSSALSEWLTQIKRVFSDAEDIVDDFECEALRKHVVNTYGSCSRKVRRFFSKSNPAVYRLRMAHHIQDINTRLAKLATDRNMFGLQIIDHDTRVVHVREMTHSHVNPSNVTGRKHDKNEIVKLLVQDSERQSLSVISIAGMGGLGKTTLAKLVFNDTNIDECFPLKMWVCVSNDFELRNVLIKILNSVPNPTQENSNNFGMEQLQNLLRNRLEGKKFLLVLDDVWNEDPARWHELKEIIDVGVEGSKVLVTTRSHGVAVIMRTKPSHLYLLGCLSEEDSLSLFVKYAFDDGEEKKHPELLKIGKEIVKKCGGLPLAVKTVGSSLFSRFDKKEWESIRDNEIWNLTQIENDILPALKLSYDQLPSYLKPCFASFSLYPEDTVIRCSEISTMWEALGFLPPPKESESMVDVANHLLYELWSRSFLLDYFDFGGDSAFMLHDLVYDLAVHIAKGEFERIDLRHKKFSENVKHLAFMENNLLAQVFPHTGLRSVYLPRRMNNEAFLITLLSRCKYLRILELRSSELESLPYFIGKLKHLRHLNLQFSKKLKRLPDSVCELQNLQTLNLIGCVELQKLPKGMRNLISLRNLRITTKQVDFPDKDIAVLTSLEELKIKDSHNLESLFNGIQLSTLKKLALYGCKSLKSVSFHAIRNINVLAICKCDKLELSMGVGSQIPNSRLKLVSLEDLPQLVTLPQWIQGSGNYLRSLFIVGCINLKELPDWLPTLVYLKLLSITNCPNLLSLPDNMHQLTNLESLEITSCPELWKRFKPGVGQDWYKISHIKDVYNLQEKKMKRKTKKKNKTIQS* 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0335 860 Gene3D - 150 324 IPR027417 -
Vra8g0335 860 Gene3D - 330 420 IPR042197 -
Vra8g0335 860 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 428 IPR027417 -
Vra8g0335 860 Gene3D Ribonuclease Inhibitor 512 840 IPR032675 -
Vra8g0335 860 CDD RX-CC_like 8 134 IPR038005 -
Vra8g0335 860 Gene3D - 10 124 - -
Vra8g0335 860 PRINTS Disease resistance protein signature 192 207 - -
Vra8g0335 860 PRINTS Disease resistance protein signature 268 282 - -
Vra8g0335 860 PRINTS Disease resistance protein signature 367 381 - -
Vra8g0335 860 PRINTS Disease resistance protein signature 681 697 - -
Vra8g0335 860 SUPERFAMILY L domain-like 494 815 - -
Vra8g0335 860 Pfam NB-ARC domain 171 417 IPR002182 GO:0043531
Vra8g0335 860 PANTHER DISEASE RESISTANCE PROTEIN RP 27 820 IPR044974 GO:0006952
Vra8g0335 860 Pfam Rx N-terminal domain 10 98 IPR041118 -
Vra8g0335 860 PANTHER OS08G0543100 PROTEIN 27 820 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0335 Vra-Chr8 4351828 4357679 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0335 190 818 WRKY Transcription Factor Family AT5G45050 24.251 8.44e-15 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0335 - - vra:106771654 1180.24