Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0311 ATGTCAGACATTCTCAAAAAGATTGCTGCCCCAGAAAATTTTGTAGTTAAGGTGAGTAGGAAAAGTGTTGTGAAAGCACTGAATCCTCCACAAGAACCATTTTCAATCACTCTCTCAAATCTTGACCTGCTTTCAGGTCGTTTTCCTGTTACATACTTGTATTTCTACCGCAAACCAGAATCAGATAACTTCAAGGTTTTTGTTGATGCTCTTAAAAGCTCTCTGGCACAAATACTTGATCACTATTATCCCTTTGCTGGCCAAATTGTTCAAAATCCTAAAACCAGTGAGCCTGAGATCATATGTGACAACAATGGTGCTCTAATCATTGAAGCACACACAGATACCCCATTAAAGAGTGTAGATTTTTATGATCTCAATAAAACTCTTCAAGATAAGGTAGTCTCAGTTGAACCAGATTTCCCGACGCAAATTCAGGTGACTGAATATTCATGTGGAGGTATGTCTATAGCCTTTACTTTTGATCATGCATTAGGTGATGCCACTTCCTTTGGTAAGTTCATTGCTTCCTGGTGTGAAATGGCTCAAAAGAAACCACTCTCGTGCATACCAGACCATACTAGACACCTTCGTGCACGTTCTTCTCCCACTTATCAACCATCCTTGGATCAAAATTTTGTGAGGTGTACCATGGAAGAGATACAGAACATGCCAATGAACCATATCTCACTGAAGCGCCTTTATCATATCAAAGCATCAAGCATCAACATGCTGCAGAAACTTGCTTCTGGGAATGGAGTCAAGAAAACAAAGATCGAGGCTTTCTCCGCGTATGTATGGAAGATAATGATTGGTAGCATTGATCAAAGGCATGAAAAGTGCAGGATGGGTTGGCTGGTGGATGGAAGAGAAAGGATCGGAAAAGGTGAGAATTTGATGTCAAATTACATTGGTAATGTGTTGTCTGTGGCATTTGGGGAGGCAAGTATTGAAGAATTGAAAGAAGGGTCAATATCAGACATTGCTAACACAGTGCATGAGGCAATTTCAAAGGTGAACAATGAGGATCATTTTTTGGACTTGATTGATTGGATTGAGTGTCATAGGCCTGGTTTGATGCTAGCAAAGGCAGTGTTGGGTGAACAAGTACCAACCATAGTGGTGTCCTCAGGACAAAGGTTTCCTGTTAGTGAGGTTGAGTTTGGATTTGGGAGGCCCTTGCTAGGGACAGTTTACACTAGCATTCCAAGGGTAGGAGTTGGTTACATGAACCAAAGGTTAAGTGCCAAGGGTGATGGTTCATGGACCGTATCTGCCATTTTGTGGCCAGAACTGGAAGATGCACTGCAGAATGACCCAATTTTCCACCCAATGTCTGTTTCTAATCTTCAACTTTAG 1359 0.4143 MSDILKKIAAPENFVVKVSRKSVVKALNPPQEPFSITLSNLDLLSGRFPVTYLYFYRKPESDNFKVFVDALKSSLAQILDHYYPFAGQIVQNPKTSEPEIICDNNGALIIEAHTDTPLKSVDFYDLNKTLQDKVVSVEPDFPTQIQVTEYSCGGMSIAFTFDHALGDATSFGKFIASWCEMAQKKPLSCIPDHTRHLRARSSPTYQPSLDQNFVRCTMEEIQNMPMNHISLKRLYHIKASSINMLQKLASGNGVKKTKIEAFSAYVWKIMIGSIDQRHEKCRMGWLVDGRERIGKGENLMSNYIGNVLSVAFGEASIEELKEGSISDIANTVHEAISKVNNEDHFLDLIDWIECHRPGLMLAKAVLGEQVPTIVVSSGQRFPVSEVEFGFGRPLLGTVYTSIPRVGVGYMNQRLSAKGDGSWTVSAILWPELEDALQNDPIFHPMSVSNLQL* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0311 452 Gene3D - 11 212 IPR023213 -
Vra8g0311 452 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 37 447 - -
Vra8g0311 452 Pfam Transferase family 16 428 - -
Vra8g0311 452 Gene3D - 215 438 IPR023213 -
Vra8g0311 452 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 37 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0311 Vra-Chr8 3988070 3989599 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0311 39 431 Monolignol Biosynthesis Gene Families AT5G48930 26.942 1.01e-28 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0311 - - gmx:100795616 791.186