Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0281 ATGGTGGATGTTGCCAATCATCTTGTGTATGAGCTATGGTCAAGATCTTTTCTTTCAGATTATCTTGACTTGGGGGGCGATTCCACATTTACATTACATGATTTGGTGTATGATCTTGCAGTTCATATTGCAAAAGGTGAGTTTGAAAGAATAGATCTCCGCAATAAAAAAAATTCTGAGAATGCCCAACATTTAGTCTTTGAAGAAAATAATTTGCTTGCTCAAGCTTTTCCTCACACAGGTTTAAGAAGTGTGTATCTTCCCTTGGGAATGAACAATGAAGCTTTCTTGATTAGATTGGTGTCAAGATGTAAATACTTGAGGATTTTAGAATTATGTTCATCTGAATTCGAGAGTTTGCCTTACTTTATTGGAAAGTTGAAACATTTAAGACATCTTAATCTCCAGTTTAATAAAAAGCTCAGGAGACTCCCTGATTCAGTCTGCGAACTTCAAAATTTACAAACTTTGAATATCTTTGGATGTATGGAGCTACAAAAACTACCCAAAGGAATGAGAAATCTAGTCAGCCTTCGGAATCTTTTTATAACCACCAAACAAGTTGATTTTCCAGAGAAAGACATTGCAGTGTTGACTTCTTTAGAAGTTTTAAATATTAGTGATTCTCATAATTTGGAGTCATTGTTCAATGGTATACAACTATCCACCCTTAAAAAGTTAGTCTTAAATAGATGTGAAAGTCTAAATTTGGTTGCGTTTCACGCCATTAGAAATATAAATGTTTTGTCTATTTGTAAGTGCGACAAGATGGAATTGTCAATGGGCATTGGAAGTGAAATCCCCGATTCAAGGTTAAAGCTTGTTATTTTTCAAGACTTGCCGCAACTGGTCACGTTGCCTCAGTGGATTCAAGGATCTGCAAACTTTTTACAAAGCTTATTTATTATAGGTTGCATCAATCTTAAGGAGCTTCCCGGTTGGCTACCAACTCTAGTTTATCTCAAACTTCTTTCTATTTGCAATTGTCCAAATCTATTGTCACTGCCTGACAACATCCATCAGCTAACAAATCTTGAAAATATAGAAATGAGTGGTTGTCCTGAATTATGGAAAAGATTCAAACCAGGAGTTGGACAAGATTGGTACAAGATATCACACATCAACATTGTTTACAATGTTCAAGAAGAAGAAGATGAAGAAGAAGATGAAGAGAAAGACGACGAAGAATAA 1191 0.3518 MVDVANHLVYELWSRSFLSDYLDLGGDSTFTLHDLVYDLAVHIAKGEFERIDLRNKKNSENAQHLVFEENNLLAQAFPHTGLRSVYLPLGMNNEAFLIRLVSRCKYLRILELCSSEFESLPYFIGKLKHLRHLNLQFNKKLRRLPDSVCELQNLQTLNIFGCMELQKLPKGMRNLVSLRNLFITTKQVDFPEKDIAVLTSLEVLNISDSHNLESLFNGIQLSTLKKLVLNRCESLNLVAFHAIRNINVLSICKCDKMELSMGIGSEIPDSRLKLVIFQDLPQLVTLPQWIQGSANFLQSLFIIGCINLKELPGWLPTLVYLKLLSICNCPNLLSLPDNIHQLTNLENIEMSGCPELWKRFKPGVGQDWYKISHINIVYNVQEEEDEEEDEEKDDEE* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0281 396 SUPERFAMILY L domain-like 32 379 - -
Vra8g0281 396 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 198 354 - -
Vra8g0281 396 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 105 236 - -
Vra8g0281 396 Gene3D Ribonuclease Inhibitor 80 379 IPR032675 -
Vra8g0281 396 Pfam Leucine rich repeat 106 162 IPR001611 GO:0005515
Vra8g0281 396 PANTHER - 198 354 - -
Vra8g0281 396 PANTHER - 105 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0281 Vra-Chr8 3605359 3606549 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0281 107 210 WRKY Transcription Factor Family AT4G12020 29.808 1.35e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0281 - - vra:106770070 769.615