Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0279 ATGGCCGAATCACTCATTGTCGCGGTTGCAGAATCACTTATAACGAAGCTCGCTTCTCGAGTTGTCGAACAAGCTTCTTTGGCGTTGGGTGTGCACCAAGAGCTACAGCAGATGAAAAAGACCATGGCACTGGTCAAAGCATTTCTGTTAGACGCTGAGCAAAAGAAGCAGCAGAACAATGCTCTGAGTGAGTGGCTAAGACAGATCAGGCAGGTGTTCGCCCACGCGGAAGACATCGTCGACAACTTTGAATGCGAAGTGTTGCGGAAGCACGTTGTCAGCTCTCACGGCAGCTTCTGCAGGAAGGTATGTCGTTTGTTTTCAACTAGTAATCCTGTGGTTTACCGTTACAGAATGGGGCGTGAGATAAAAGGCATCAAGAAGCAGTTAGAGAAGGTTGCAACTGATGGCCACATGTTTGGTCTTCAAAGCAGTGACAAGGATACAAAGGTTTTGCATGCGAGGGAAATGACTCATTCACATGTAAATGTCTCAAATGTGGTAGGGAGAGAACATGATAAGCAGAAGATAATAGAGCTTTTGCTGCAAGATGATCATCATGACAGAAGTCTCTCAGTGATTTCAATTGTGGGATTTGGAGGCTTGGGAAAGACCACTCTCGCAAAGGTAGTGTTCAATGACACTGCTATTGAGGAATGTTTCACTTTGAAGATGTGGGTGTGTGTCTCTAATGATTTCGAACTTAGGAATGTTCTTATGAAAATCCTAAACTCTGCTCCTAACCCCACCAATGAGAAGTTCAAAAATTTAGACACGGATCAACTTCAAATTCGTTTGAGAAGTTGCCTTCAACGTGAGAAGTTCTTGCTCGTCTTAGACGATGTCTGGAACGAGGATCGTGTTAAATGGGATGAGTTGAAGGAAATCATAGAGATGGTAGGTAACAAAGGAAGTAAAATCTTGGTGACTACTCGTAGTCACTCAATTAATGCCATGATGCGCACTAAATCCTCTAACTCTTACATTCTAAAAGGCCTTTCTGAGGAGGATTCCATGTCTCTGTTTGTCAAATCTGCTTTTGATGATGGAGAAGGGAAAAACCATCCAGAGCTAATGGAGATTGGGAGACAAATTGTGAGAAAATGTGGAGGAATACCATTGGCGGTGAGAACCTTAGGAAGCTCACTGTTCTCAAGGGTGGATCGAAAAGAGTGGGAGAATATAAGAGACAATGAAATTTGGAACTTAAAACAAAATGAAAATGATATTTTGCCTGCTCTTGAGTTAAGTTATGATCAACTACCTTCGCATTTGAAACGATGTTTTGCTTGCTTCTCTCTTACCTCGAAGGACTTTGATGTTTCAAGTTCTTACGTTGCTCTGCTGTGGGAGGCACTTGGTTTTCTTTCCGCACCAAAGCAAAATGAAACAACACATGATGTTGCTAATGAATATCTGCGTGAGCTATGGTCAAGATCTTTTCTCACAGATTTTCTTGACATGGGGAGCACATGCAGATTTAAATTACATGATTTAGTCCGTGATCTTGCAGTGTACGTAGCCAAAGGTGAGTTTCAAATATTGTATCCCCACAGTACAAGTATATCTGAGCATGCCCAACACTTGTCATTCATTGAAAATGATATGCTTGGCCAAGATCTCGTTCCCATAGGTGCAAGAACTATAATTTTTCCCATGGAAGCTACTAATGATGCTTTCTTGAATACGTTGGTATCCAGGTGCAAATACCTTAGAGTTCTAGACTTGAGTTATTCTGAATACGAGAGTTTGCCTAGCTGCATTGGAAAGTTGAAACATTTAAGATATCTCAATCTTTCAGGTAATAAAAAACTTAAGGGACTCCCAAATTCCGTATGCAAACTCCAAAATTTGCAAACTTTGGACCTAAGAGGTTGCATAAAGCTGCAAAAACTGCCCAAAGGAATAAGAAAGTTAATCAGCCTTCGTCGGCTGCTTGTAACCACTAGGCAACCAGATTTTCCAGACAAAGAGATTTCAAAATTGGCTTCTATGGAAACAGTAGAACTCTATTCTTGTGATAATTTGGAGTCATTGTTCCAAGCTATACAACCTAGAAGTCTGAAGTTTTTGCATCTTTCTGGTTGTGGGGGTTTAAAGTCTCTGTCCTTTCATGTCATTACAAATTTAGAGAGTTTGGTTATCTTCAAATGCAGTAAGATGGAATTGTCAATGGGCCTTAGCAACCTTAATTCCATTCCTGATTCAAGGTTAAAATTACTTGTTCTTCAAAGTTTGCCACAGTTGGTCACTTTGCCTCAGTGGTTGCAAGGATCTGTGAACACACTGCATTCCTTGTTACTTGTTGACTGCAACAATCTTGAGGAGCTTCCTGAGTGGCTGTCAACTTTGAACTGTCTCAAACTACTTATAATTGAACATTGTCCAAAGCTGATCTCACTCCCTGATACCACGCATCGCCTCCGAAACCTTGAACATTTGGAAATCAATGATTGTCCTGAATTATGCAAAAGATGTCAGCCAGGAGTTGGACTGGATTGGCACAAAATATCCCACATCAAACAAGTTATCATTGGTGAACCAGAAGAGTAG 2553 0.4113 MAESLIVAVAESLITKLASRVVEQASLALGVHQELQQMKKTMALVKAFLLDAEQKKQQNNALSEWLRQIRQVFAHAEDIVDNFECEVLRKHVVSSHGSFCRKVCRLFSTSNPVVYRYRMGREIKGIKKQLEKVATDGHMFGLQSSDKDTKVLHAREMTHSHVNVSNVVGREHDKQKIIELLLQDDHHDRSLSVISIVGFGGLGKTTLAKVVFNDTAIEECFTLKMWVCVSNDFELRNVLMKILNSAPNPTNEKFKNLDTDQLQIRLRSCLQREKFLLVLDDVWNEDRVKWDELKEIIEMVGNKGSKILVTTRSHSINAMMRTKSSNSYILKGLSEEDSMSLFVKSAFDDGEGKNHPELMEIGRQIVRKCGGIPLAVRTLGSSLFSRVDRKEWENIRDNEIWNLKQNENDILPALELSYDQLPSHLKRCFACFSLTSKDFDVSSSYVALLWEALGFLSAPKQNETTHDVANEYLRELWSRSFLTDFLDMGSTCRFKLHDLVRDLAVYVAKGEFQILYPHSTSISEHAQHLSFIENDMLGQDLVPIGARTIIFPMEATNDAFLNTLVSRCKYLRVLDLSYSEYESLPSCIGKLKHLRYLNLSGNKKLKGLPNSVCKLQNLQTLDLRGCIKLQKLPKGIRKLISLRRLLVTTRQPDFPDKEISKLASMETVELYSCDNLESLFQAIQPRSLKFLHLSGCGGLKSLSFHVITNLESLVIFKCSKMELSMGLSNLNSIPDSRLKLLVLQSLPQLVTLPQWLQGSVNTLHSLLLVDCNNLEELPEWLSTLNCLKLLIIEHCPKLISLPDTTHRLRNLEHLEINDCPELCKRCQPGVGLDWHKISHIKQVIIGEPEE* 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0279 850 PANTHER OS08G0543100 PROTEIN 18 827 - -
Vra8g0279 850 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 431 IPR027417 -
Vra8g0279 850 Pfam NB-ARC domain 171 419 IPR002182 GO:0043531
Vra8g0279 850 Gene3D - 332 422 IPR042197 -
Vra8g0279 850 Gene3D Ribonuclease Inhibitor 685 829 IPR032675 -
Vra8g0279 850 Gene3D Ribonuclease Inhibitor 517 684 IPR032675 -
Vra8g0279 850 CDD RX-CC_like 8 134 IPR038005 -
Vra8g0279 850 SUPERFAMILY L domain-like 495 843 - -
Vra8g0279 850 Gene3D - 148 326 IPR027417 -
Vra8g0279 850 Gene3D - 423 505 IPR036388 -
Vra8g0279 850 PRINTS Disease resistance protein signature 193 208 - -
Vra8g0279 850 PRINTS Disease resistance protein signature 269 283 - -
Vra8g0279 850 PRINTS Disease resistance protein signature 369 383 - -
Vra8g0279 850 PRINTS Disease resistance protein signature 613 629 - -
Vra8g0279 850 PANTHER DISEASE RESISTANCE PROTEIN RP 18 827 IPR044974 GO:0006952
Vra8g0279 850 Gene3D - 10 132 - -
Vra8g0279 850 Pfam Rx N-terminal domain 10 97 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0279 Vra-Chr8 3593064 3597305 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0279 176 822 WRKY Transcription Factor Family AT5G45050 24.093 1.78e-14 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0279 - - gmx:100780033 1328.54