Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0277 ATGATATCTAGATCAATTCAAACTAAACCAAGGTATCCTTGCATTTCATTCCCACAGATCTCTCTGAAAAACATCATGGCCGAATCACTTCTTTTCACCTTCGCAGAATCACTCATAGGGAAGCTTGCTTCTGGAGCCGTTCACGAAGCTTCTCTTGCTCTCGGTGTGCACGCAGATCTTCAACAGATGAAAATGAGTATGTCACTCATCAAAGCTTTCCTGTTAGATGCTGAGCAAAAGAAGCCAAGGAGCAACTCACTGAGTGAATGGCTGATACAGATCAAGCAAGTGTTCTCCCACGCAGAAGACTTAGTTGATGATTTTGAGTGTGAAGCGTTGCGGAAGCACGTTGTCAACACTCGCGGTGGCTTCACAAGACAGGTACGTCGTTTTTTCTCAACCAGTAATCCAATCATTTACCGAATCAGAATGGCACATGAGATAAAAGACATCAAGGAGAGGTTGCAGAAAGTTGCAGCTGATGGGAACACGTTCGGCCTTCAAATCATTGACCAAGATACACGTGTCGTGCATGTGACGGATACTACTTATTCCCACGTAAACCCTTCCAATGTTATTGGAAGACATCATGAAAAACAGGAAATACTAAAGCTTTTACTACAACATGATCATGATGGTTATGACAAAAGTCTCTCAGTTGTTTCCATTCTGGGATTCGGTGGTTTGGGAAAGACCACACTGGCAAAGTTGGTGTTCAATGACACCACCATCGACGAGTGTTTCCCATTGAAGATGTGGGTTTGTGTCTCTGGTGATTTTGAGCTTAGGAATGTGCTTATTAAGATCCTCAATTCTGCTTTAAACCCAACTAACGAAAACTTCAAAAACATTGAGACTGAGCAGCTTCAAAATCGTTTGAGAAATACACTTCAACGCCAGAAGTTCTTGCTTGTGCTGGATGATGTGTGGAACGAGTATCAAGCTAGATGGGATGATTTGAAGGAAATACTAGATGTAGGTGTTGAGGGGTGTAAAATCTTAGTGACAACTCGTAGCCACTTGACAGCTACCATGATGTGCACCAAATCCTCCAACTCTTACCATCTAGAACGCCTTTCTGAAGATGATTCCTTCTTTTTATTTGTCAAAACGGCTTTTAAAGAAGGGGAAGAAGAAAGATATCCACAGTTGTTGGAGATTGGGAAGGAAATCGTGATCAAGTGTGGAGGAATACCATTGGCAGTGAAAACTTTAGCGAGTTCACTGTTCTCTGTGGTTGGTAAAAGCAAGTGGGAGGCTATGAGAGACGATAAGATTTGGAATTTGCCACAAAAAGAAAAGGACATTTTGCCTGCTCTTGAGATAAGTTACAATCAACTGCCTTCCCATTTGAAACCCTGTTTTGTTTGCTTCTCCCTTTTCTGTGAGGGTTCTGAATTTTTTAGCTTTTATGTTGCTAAGTTGTGGGAGGCACTTGGTTTTCTTCCACCACCAAAGGAAAATGAGACAATGCATGATATTGCCATTCAATTTCTGCGTGAGCTGTGGTCAAGATCTTTTCTCACAGATTTCATTGAATTAGGCCATGGTTACAGTTTTAAATTACATGATTTAGTGCATGATCTTGCTATGTATACTGCCAAAGGTGAGTTTCAGACAATATACCCCCGCAGTTCAAAAATATCTCCCAATGCTCGACATTTGGCATTCAGTGATAATAATCTGCTAGACCAAGCTGTCATTCCTACTGGTCTGAGAACTATAATTTTTCCTGATGAAGCCACCAATGAAGCTTTCTTGAACACATTGGTGTCAAGGTGCAAATACTTGAGGTTTTTAGAACTGAGTAACTCTATATACGAGAGTTTACCTCCTTCCATTGGAAAGTTGAAACACTTAAGATATCTCAGTCTCTTTGGGAGTAAAAACCTTAAGGGACTTCCTCGCTCAGTTTGTAACCTGCAAAATTTGGAAACTTTGAACCTTAATCAATGCACGGAGCTACAAGAATTGCCCAAAGGAATAAGCAAACTCATCAGCCTACGCCAGTTGCATATAACCACAAGGCAACTTCATTTTCCGGACCAAGAAATCTCAACTTTGACTTCTTTAGAGACTCTAACATTCAACTCTTGTGATAATTTGGAGTCATTGTTGAAAGGGATACAACTTTCTAGTCTTAAAAATTTGTCTTTGCATGACTGCGGGAAACTGAAATCTTTGTCCTCTCATGTCATAACAAATTTGGAGAATTTGGTTATCGACAATTGTTGTGAGTTGGAATTGTCAATGGGCTTTGGCAACCAAATCCCTGATTTAAGGTTAAAGTCTCTTGCTTTTAAAAGTTTGCAACAGTTGGTCACTTTGCCTCAGTGGTTGCAAGGATCTATGAACAAACTACACTCCTTGGTAATTGCTGACTGCAACAATCTTAAGGAGCTTCCTGAGTGGCTTTCTTCTACGATTTGTCTCAAACTGCTTGTAATTGAATACTGTTCATCCCTGCAGTCACTCCCTGATAACCTCAAAAATCTTGAAAATTTACTCATTAATAGCTGTCCTGAATTATGCAAAAGATACCAGCCGGGGGTTGGACAGGATTACCACAAAATATCTCACATCCAAAAAGTTTTTGTTGGTGAATTGGAAGAGTGA 2616 0.4044 MISRSIQTKPRYPCISFPQISLKNIMAESLLFTFAESLIGKLASGAVHEASLALGVHADLQQMKMSMSLIKAFLLDAEQKKPRSNSLSEWLIQIKQVFSHAEDLVDDFECEALRKHVVNTRGGFTRQVRRFFSTSNPIIYRIRMAHEIKDIKERLQKVAADGNTFGLQIIDQDTRVVHVTDTTYSHVNPSNVIGRHHEKQEILKLLLQHDHDGYDKSLSVVSILGFGGLGKTTLAKLVFNDTTIDECFPLKMWVCVSGDFELRNVLIKILNSALNPTNENFKNIETEQLQNRLRNTLQRQKFLLVLDDVWNEYQARWDDLKEILDVGVEGCKILVTTRSHLTATMMCTKSSNSYHLERLSEDDSFFLFVKTAFKEGEEERYPQLLEIGKEIVIKCGGIPLAVKTLASSLFSVVGKSKWEAMRDDKIWNLPQKEKDILPALEISYNQLPSHLKPCFVCFSLFCEGSEFFSFYVAKLWEALGFLPPPKENETMHDIAIQFLRELWSRSFLTDFIELGHGYSFKLHDLVHDLAMYTAKGEFQTIYPRSSKISPNARHLAFSDNNLLDQAVIPTGLRTIIFPDEATNEAFLNTLVSRCKYLRFLELSNSIYESLPPSIGKLKHLRYLSLFGSKNLKGLPRSVCNLQNLETLNLNQCTELQELPKGISKLISLRQLHITTRQLHFPDQEISTLTSLETLTFNSCDNLESLLKGIQLSSLKNLSLHDCGKLKSLSSHVITNLENLVIDNCCELELSMGFGNQIPDLRLKSLAFKSLQQLVTLPQWLQGSMNKLHSLVIADCNNLKELPEWLSSTICLKLLVIEYCSSLQSLPDNLKNLENLLINSCPELCKRYQPGVGQDYHKISHIQKVFVGELEE* 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0277 871 Gene3D - 438 532 IPR036388 -
Vra8g0277 871 Pfam Rx N-terminal domain 36 121 IPR041118 -
Vra8g0277 871 PRINTS Disease resistance protein signature 220 235 - -
Vra8g0277 871 PRINTS Disease resistance protein signature 296 310 - -
Vra8g0277 871 PRINTS Disease resistance protein signature 395 409 - -
Vra8g0277 871 PRINTS Disease resistance protein signature 639 655 - -
Vra8g0277 871 Gene3D - 35 149 - -
Vra8g0277 871 SUPERFAMILY L domain-like 513 846 - -
Vra8g0277 871 Pfam NB-ARC domain 215 445 IPR002182 GO:0043531
Vra8g0277 871 PANTHER OS08G0543100 PROTEIN 58 844 - -
Vra8g0277 871 Gene3D - 177 351 IPR027417 -
Vra8g0277 871 CDD RX-CC_like 34 159 IPR038005 -
Vra8g0277 871 PANTHER DISEASE RESISTANCE PROTEIN RP 58 844 IPR044974 GO:0006952
Vra8g0277 871 Gene3D Ribonuclease Inhibitor 535 707 IPR032675 -
Vra8g0277 871 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 457 IPR027417 -
Vra8g0277 871 Gene3D Ribonuclease Inhibitor 709 849 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0277 Vra-Chr8 3576752 3579778 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0277 193 832 WRKY Transcription Factor Family AT5G45050 24.496 1.03e-13 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0277 - - gmx:100780033 1134.4