Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0263 ATGGTTCAGAACGATAACATCAACAAGGAGAGAGACCTTGAGTTTCTGTTTGAGGACAACGACGACGATGCAGAACAGCAGCAGGACATTGAAGCGGACAAGTACCAAAGTAGCAGTGAAGAAGACAGTGATGTCGAGCCTCGCTCTTTCTCTTCTCACCAATGGCCTCAGAGTTACAAAGAGACTACGGATTCTTACACAATAGCTGCTGCTCCAAATCTGGAGTCAGTTCTGCGAGGGCCGAGTTTTATATATTCTAGTTTTGACAATCGTTCTAAGAGTAGCTTAGACATTGATGGAAGGACACCTTTTCTATCTTCTNAAGGCATTAATCAATCAACTTGGTGGGAGAAAGCTTCAGTACAACGCCATTTTACTGGAGAATTACCCATTGGATATGGATGCAGCTTCACTCAGACAGTTTTCAATAGCGTTAATGTGATGGCTGGAGTNGGCCTTCTATCTACACCATACACAGTGAATCAAGCTGGGTGGATCGGCATTGCAGTGATGCTCTTTTTTGCAGTTATTTGCTGTTATACAGCCACTCTTATGAGACACTGCTTTGAAAGCAGAGAAGGAATCACTACCTACCCAGATATAGGAGAAGCTGCATTTGGAAGATATGGCCGTATTGTTGTATCGATCATTTTGTACATTGAATTATATTCATATTGTGTGGAGTTCATCACCTTGGAAGGAGACAACCTCAGTAGTCTGTTTCCTGGTACTTCCTTAAATCTGGGTATTTTCCAGTTAGACACTATGCATCTCTTTGGAGTTCTGACAGCACTTATTATTCTCCCAACTGTTTGGTTGAAGGATCTTCGCCTAATTTCTTATCTATCAGCTGGAGGGGTTGTTGCAACAGTTTTGATTATTATCTGTGTGATTTTTGTTGGGACCACAGAAGGTGTTGGATTCCATCACACTGGTCAATTGGTAAAGTGGAATGGCATTCCATTTGCCATTGGTGTCTATGGATTTTGCTTTGCAGGACATTCGGTTTTCCCAAACATTTATCAGTCCATGGCTGACAAGAAACAGTTTACCAAAGCCCTCATAACATGTTTTTCTTTGTGTGTTTTGATATACGGAAGCGTTGCAATCATGGGATTTCTCATGTTTGGTGATGGCACTTTGTCTCAGATAACATTGAATATGCCACCAGGTGCTATTGCTTCCAAAATTGCATTGTGGACAACGGTTATTAACCCATTCACTAAATATGCTCTGTTGCTAAACCCACTGGCAAGGAGTTTAGAGGAGTTGCTGCCAGAGAGAATTTCAACTACATATTGGTGTTTCATTCTTCTTAGAACAGCCCTTGTTGCATCTACAGTTTGTGTTGCTTTTCTGGTTCCGTTTTTTGGACTTGTGATGGCTTTAATTGGTTCTCTCTTCAGTTTACTTGTGTCAGCGATAATGCCAACTTTATGTTTCCTGAAAATTATTGGGAAAAAAGCGACAAAGACACAGGTTGCACTCAGTGTTGCAATTGCTGTACTTGGAATGATTTGTGCAGTTCTTGGAACATACTCCTCTGTGTTGAGTATTGCAGACAGTTACTGA 1572 0.4122 MVQNDNINKERDLEFLFEDNDDDAEQQQDIEADKYQSSSEEDSDVEPRSFSSHQWPQSYKETTDSYTIAAAPNLESVLRGPSFIYSSFDNRSKSSLDIDGRTPFLSSXGINQSTWWEKASVQRHFTGELPIGYGCSFTQTVFNSVNVMAGVGLLSTPYTVNQAGWIGIAVMLFFAVICCYTATLMRHCFESREGITTYPDIGEAAFGRYGRIVVSIILYIELYSYCVEFITLEGDNLSSLFPGTSLNLGIFQLDTMHLFGVLTALIILPTVWLKDLRLISYLSAGGVVATVLIIICVIFVGTTEGVGFHHTGQLVKWNGIPFAIGVYGFCFAGHSVFPNIYQSMADKKQFTKALITCFSLCVLIYGSVAIMGFLMFGDGTLSQITLNMPPGAIASKIALWTTVINPFTKYALLLNPLARSLEELLPERISTTYWCFILLRTALVASTVCVAFLVPFFGLVMALIGSLFSLLVSAIMPTLCFLKIIGKKATKTQVALSVAIAVLGMICAVLGTYSSVLSIADSY* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0263 523 MobiDBLite consensus disorder prediction 1 56 - -
Vra8g0263 523 PANTHER OS05G0424000 PROTEIN-RELATED 29 521 - -
Vra8g0263 523 Gene3D Amino acid/polyamine transporter I 134 521 - -
Vra8g0263 523 MobiDBLite consensus disorder prediction 34 48 - -
Vra8g0263 523 Pfam Transmembrane amino acid transporter protein 136 516 IPR013057 -
Vra8g0263 523 PANTHER AMINO ACID TRANSPORTER AVT1A 29 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0263 Vra-Chr8 3354291 3359233 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0263 18 458 Amino Acid or Auxin Permease AAAP Family AT2G41190 61.925 0.0 597