Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0263 ATGGTTCAGAACGATAACATCAACAAGGAGAGAGACCTTGAGTTTCTGTTTGAGGACAACGACGACGATGCAGAACAGCAGCAGGACATTGAAGCGGACAAGTACCAAAGTAGCAGTGAAGAAGACAGTGATGTCGAGCCTCGCTCTTTCTCTTCTCACCAATGGCCTCAGAGTTACAAAGAGACTACGGATTCTTACACAATAGCTGCTGCTCCAAATCTGGAGTCAGTTCTGCGAGGGCCGAGTTTTATATATTCTAGTTTTGACAATCGTTCTAAGAGTAGCTTAGACATTGATGGAAGGACACCTTTTCTATCTTCTNAAGGCATTAATCAATCAACTTGGTGGGAGAAAGCTTCAGTACAACGCCATTTTACTGGAGAATTACCCATTGGATATGGATGCAGCTTCACTCAGACAGTTTTCAATAGCGTTAATGTGATGGCTGGAGTNGGCCTTCTATCTACACCATACACAGTGAATCAAGCTGGGTGGATCGGCATTGCAGTGATGCTCTTTTTTGCAGTTATTTGCTGTTATACAGCCACTCTTATGAGACACTGCTTTGAAAGCAGAGAAGGAATCACTACCTACCCAGATATAGGAGAAGCTGCATTTGGAAGATATGGCCGTATTGTTGTATCGATCATTTTGTACATTGAATTATATTCATATTGTGTGGAGTTCATCACCTTGGAAGGAGACAACCTCAGTAGTCTGTTTCCTGGTACTTCCTTAAATCTGGGTATTTTCCAGTTAGACACTATGCATCTCTTTGGAGTTCTGACAGCACTTATTATTCTCCCAACTGTTTGGTTGAAGGATCTTCGCCTAATTTCTTATCTATCAGCTGGAGGGGTTGTTGCAACAGTTTTGATTATTATCTGTGTGATTTTTGTTGGGACCACAGAAGGTGTTGGATTCCATCACACTGGTCAATTGGTAAAGTGGAATGGCATTCCATTTGCCATTGGTGTCTATGGATTTTGCTTTGCAGGACATTCGGTTTTCCCAAACATTTATCAGTCCATGGCTGACAAGAAACAGTTTACCAAAGCCCTCATAACATGTTTTTCTTTGTGTGTTTTGATATACGGAAGCGTTGCAATCATGGGATTTCTCATGTTTGGTGATGGCACTTTGTCTCAGATAACATTGAATATGCCACCAGGTGCTATTGCTTCCAAAATTGCATTGTGGACAACGGTTATTAACCCATTCACTAAATATGCTCTGTTGCTAAACCCACTGGCAAGGAGTTTAGAGGAGTTGCTGCCAGAGAGAATTTCAACTACATATTGGTGTTTCATTCTTCTTAGAACAGCCCTTGTTGCATCTACAGTTTGTGTTGCTTTTCTGGTTCCGTTTTTTGGACTTGTGATGGCTTTAATTGGTTCTCTCTTCAGTTTACTTGTGTCAGCGATAATGCCAACTTTATGTTTCCTGAAAATTATTGGGAAAAAAGCGACAAAGACACAGGTTGCACTCAGTGTTGCAATTGCTGTACTTGGAATGATTTGTGCAGTTCTTGGAACATACTCCTCTGTGTTGAGTATTGCAGACAGTTACTGA 1572 0.4122 MVQNDNINKERDLEFLFEDNDDDAEQQQDIEADKYQSSSEEDSDVEPRSFSSHQWPQSYKETTDSYTIAAAPNLESVLRGPSFIYSSFDNRSKSSLDIDGRTPFLSSXGINQSTWWEKASVQRHFTGELPIGYGCSFTQTVFNSVNVMAGVGLLSTPYTVNQAGWIGIAVMLFFAVICCYTATLMRHCFESREGITTYPDIGEAAFGRYGRIVVSIILYIELYSYCVEFITLEGDNLSSLFPGTSLNLGIFQLDTMHLFGVLTALIILPTVWLKDLRLISYLSAGGVVATVLIIICVIFVGTTEGVGFHHTGQLVKWNGIPFAIGVYGFCFAGHSVFPNIYQSMADKKQFTKALITCFSLCVLIYGSVAIMGFLMFGDGTLSQITLNMPPGAIASKIALWTTVINPFTKYALLLNPLARSLEELLPERISTTYWCFILLRTALVASTVCVAFLVPFFGLVMALIGSLFSLLVSAIMPTLCFLKIIGKKATKTQVALSVAIAVLGMICAVLGTYSSVLSIADSY* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0263 523 MobiDBLite consensus disorder prediction 1 56 - -
Vra8g0263 523 PANTHER OS05G0424000 PROTEIN-RELATED 29 521 - -
Vra8g0263 523 Gene3D Amino acid/polyamine transporter I 134 521 - -
Vra8g0263 523 MobiDBLite consensus disorder prediction 34 48 - -
Vra8g0263 523 Pfam Transmembrane amino acid transporter protein 136 516 IPR013057 -
Vra8g0263 523 PANTHER AMINO ACID TRANSPORTER AVT1A 29 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0263 Vra-Chr8 3354291 3359233 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0263 18 458 Amino Acid or Auxin Permease AAAP Family AT2G41190 61.925 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0263 K15015 - gmx:100790344 870.537