Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0258 ATGAGTTTTTGCTTTTCTACTAGTCAATCTTCAATAAATGCTGTTGTCCTGAAAGGTCGTTCTCCGCTGCTGATGAGCAGTAACATTCATGGACTTTGGTCCCGTGGAATATCCTCTTCATTTCCTTCTAGTTCATTTCCTGGGGAGTCAGAGATAAATCATGTTGATTTTTCTGTTTGCACAAAATTGTCTTGTTCAACGGTTATGGGCCAAACAATTAGAGGAGGCTTCCTTCGATCATGCTGCTCCAAGCAAAGGGGAAATACTCGATTCTTTAGTTCTGTAGTACCTCGGAAGAGGTATCATGAAATTTCACTGGCATGCCAAAGTATGAATATGAGGCTTTTGTTACCCAAACAAAAATTGCTGCACAAAGTTAAGTGTAATTTTGGTCCAGTAAGTTGGCTGCGGGGATGTGCTTCAGTTGGCTTGATTTTTGGGTTACTGGTATGTAGTTCTAGTAGTGAGCCTGCTCATGCCGAATCACATTCTGAAAATGAAAATAGGAAAGATGACTGCAACGAGTATGAGTCAAACGTTAAATTCTCACATGGGAAGAAAGTTTATACTGACTATTCTGTAATTGGAATACCAGGGGATGGAAGATGTTTATTCCGCTCTGTTGCTCGTGGGGCCTGTTTGAGGTCTGGAAAGCCTCCTCCTAGTGAAAGCATCCAAAGGGAGCTGGCAGATGATTTACGAGCCAGAGTAGCTGATGAGTTTGTCAAAAGAAGGGAAGAAACTGAATGGTTTATTGAAGGTGATTTTGATACATATATTTCACACATAAGGAAGCCTCATGTGTGGGGAGGTGAACCAGAATTGTTCATTGCATCACATGTTTTGCAGATGCCTATCACTGTATACATGTATGATAAGGAGGCTGGTGGCTTGATATCAATTGCTGAGTATGGCCAAGAATACGGCAAAGAAAACCCAATTAGAGTTCTCTACCACGGGTTTGGTCATTATGATGCCCTTGATATCCCTACAAGGAAGGGTCCCAAGCCACGTCTGTAG 1020 0.4196 MSFCFSTSQSSINAVVLKGRSPLLMSSNIHGLWSRGISSSFPSSSFPGESEINHVDFSVCTKLSCSTVMGQTIRGGFLRSCCSKQRGNTRFFSSVVPRKRYHEISLACQSMNMRLLLPKQKLLHKVKCNFGPVSWLRGCASVGLIFGLLVCSSSSEPAHAESHSENENRKDDCNEYESNVKFSHGKKVYTDYSVIGIPGDGRCLFRSVARGACLRSGKPPPSESIQRELADDLRARVADEFVKRREETEWFIEGDFDTYISHIRKPHVWGGEPELFIASHVLQMPITVYMYDKEAGGLISIAEYGQEYGKENPIRVLYHGFGHYDALDIPTRKGPKPRL* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0258 339 Gene3D - 173 334 - -
Vra8g0258 339 SUPERFAMILY Cysteine proteinases 191 327 IPR038765 -
Vra8g0258 339 ProSiteProfiles OTU domain profile. 192 330 IPR003323 -
Vra8g0258 339 Pfam OTU-like cysteine protease 198 324 IPR003323 -
Vra8g0258 339 PANTHER OS09G0487700 PROTEIN 13 339 - -
Vra8g0258 339 PANTHER OTU DOMAIN CONTAINING PROTEIN 13 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0258 Vra-Chr8 3289289 3294231 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0258 - - gmx:100810338 620.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g0258 8 3289289 3294231 Vra8g0258 8 3289289 3294231 ECH
Vra8g0258 8 3289289 3294231 Vra3g0656 3 7077780 7079185 PCT