Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0255 ATGAGGCAACGGCGGCCACGACTACCACCAAGTCCTACAGCCCTCCCTGTATTAGGACACCTCCACCTCCTCAGCAACCTCCCTCACCAAGCATTTCACACCATCTCATCACGCTATGGCCCTTTGGTCTACCTCTTCCTTGGTTCCAACCCTTGTGTTCTTGTTTCATCGCCTGAAATGGCAAGTCAGTGCCTCAAAACCAACGAATCATGCTTCCTAAACCGACCCAAAAGAACAAATATGGACTACATCACATACGGTTCTTCAGATTTTGTGCAGGCACCCTATGGACCTTATTGGAGGTTCATGAAAAGGCTTTGCATGACTGAACTCCTCGGAAGCCGCATGCTTCACCAGCACCTTCCCATTAGAGCTGAGGAGACAAGGCTGTTCTTGAACACCATCATGCAAAAGGCTGCTTTGAGAGAGGAGGTCAACATAAGCAAGGAGCTAGCCATGCTCACAAATAACATAATCACAAGAATGGCTTTGAGAAGAAGGTGTTGTGATGTTGAAGGTGAAGGGCACCAGTTGATTGAGCTGGTGAAAGAGATGACTGAGCTTTGTGGGAAGTTCAACTTGGGAGACATGTTGTGGTTTGTTAGGAAGTTGGATTTGCAGGGGTTTGGTAAAAAGCTTGAGAGAGTTAGAAGTAGGTATGATGCCATAATGGAGAAGATCATAAAGGAACACGAAGATGCAAGAAGAAAGAAGAAGGAAAAAGGTGGTGATGGAGATGAAACAGTGAAGGATTTACTTGATATTCTTCTTGATATCTATGCTGATGAACATTCAGAGATTAGATTAACAAGAGAAAATATCAAGGCCTTCATATTGAATATGTTTGGTGCTGGAACTGAGACATCAGCCGTTACAATAGAGTGGGCTTTAGCTGAGCTAATAAACCATGGAGACATGATGGTAAAAGCAAGGGAAGAGATTGAATCAGTGGTTGGTAAGAAGAGATTGGTGGAGGAATCAGATATTCCTAACCTTCCTTATGTTCAGTCCATAGTGAAGGAAACAATGAGGCTTCACCCCACAGGACCTTTGATAGGGAGGCAATCCACTGAAGATTGTAAAGTTAAAGGGTATGAGATTCCAGCAAAAACCACTGTGTTTGTGAATGTATGGGCCATTGGTAGAGATCCAAAGTACTGGGAAAACCCACTCGAGTTCAAGCCAGAGAGGTTCCTTGATGAAGAGGGAAAAAGCCCTTTGGATTTGAAGGGGCAGCATTTTGAACTTTTGTCATTTGGAGCTGGGAAAAGAAGCTGCCCTGGTGCTTCACTGGCTTTGCAGATCGTTCCCACAACACTGGCTGGAATGATTCAGTGTTTTGAATGGAAGGTTGGTGAAGATGGGAAAGGAGTTGTTGACATGGAAGAAGGACCTGGAATGGCACTTCCTAGGGCACATCCCTTGCTATGTCTTCCAGTTGTTAGGTTTTCCTCCTTTCTTTAA 1464 0.446 MRQRRPRLPPSPTALPVLGHLHLLSNLPHQAFHTISSRYGPLVYLFLGSNPCVLVSSPEMASQCLKTNESCFLNRPKRTNMDYITYGSSDFVQAPYGPYWRFMKRLCMTELLGSRMLHQHLPIRAEETRLFLNTIMQKAALREEVNISKELAMLTNNIITRMALRRRCCDVEGEGHQLIELVKEMTELCGKFNLGDMLWFVRKLDLQGFGKKLERVRSRYDAIMEKIIKEHEDARRKKKEKGGDGDETVKDLLDILLDIYADEHSEIRLTRENIKAFILNMFGAGTETSAVTIEWALAELINHGDMMVKAREEIESVVGKKRLVEESDIPNLPYVQSIVKETMRLHPTGPLIGRQSTEDCKVKGYEIPAKTTVFVNVWAIGRDPKYWENPLEFKPERFLDEEGKSPLDLKGQHFELLSFGAGKRSCPGASLALQIVPTTLAGMIQCFEWKVGEDGKGVVDMEEGPGMALPRAHPLLCLPVVRFSSFL* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0255 487 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 419 428 IPR017972 GO:0005506|GO:0016705
Vra8g0255 487 PANTHER CYTOCHROME P450 FAMILY PROTEIN 4 484 - -
Vra8g0255 487 PRINTS E-class P450 group I signature 36 55 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g0255 487 PRINTS E-class P450 group I signature 273 290 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g0255 487 PRINTS E-class P450 group I signature 293 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g0255 487 PRINTS E-class P450 group I signature 336 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g0255 487 PRINTS E-class P450 group I signature 376 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g0255 487 PRINTS E-class P450 group I signature 416 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g0255 487 PRINTS E-class P450 group I signature 426 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g0255 487 SUPERFAMILY Cytochrome P450 9 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g0255 487 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 484 - -
Vra8g0255 487 Gene3D Cytochrome P450 1 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g0255 487 Pfam Cytochrome P450 9 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g0255 487 PRINTS P450 superfamily signature 284 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g0255 487 PRINTS P450 superfamily signature 337 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g0255 487 PRINTS P450 superfamily signature 417 426 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g0255 487 PRINTS P450 superfamily signature 426 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0255 Vra-Chr8 3229887 3231624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0255 1 482 Cytochrome P450 AT5G06900 54.339 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0255 K24188 - gmx:100807524 803.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g0255 8 3229887 3231624 Vra8g0255 8 3229887 3231624 ECH
Vra8g0255 8 3229887 3231624 Vra3g0226 3 2523220 2525200 PCT