Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra8g0228 | ATGATTTATATAAACAAAGGAATGATGCATCATAAACATTTAAAACTCAGAATAGGCCTTCAAAAATCAAGCCACTCTTTGCCATTTCAAAACGGAAATATGCAGATCCCTTGGATAGTCAAATATCACTATGCAGCTACGCTCTTCTTCGTTACCGTTGCTCTTACCAAAGTTACCTGTTTTCAGTTCAACTTCCCTTCCTTCCCAGATGACTCTAATCTATTGCTGCTCGGGAGTTCAAGAATATTCTTAGATGCCATCCAAGTAACCCTTGATAGTCGTGGTACTATAGAGAATTATTCTGGACGTGCTCTCTACAGAAAGCCATACCAACTTTGGAACCAAAATCAAATAGCTTCCTTCAACACCACTTTTGTGCTCCGAATCACTCCGGAAACTACTCCTGGTGGTGAAGGCTTGGCCTTTATCTTAACTTCAGATAGGACTGTCCCAGAAAACAGTGATGGACAATGGATTGGTATTGTAAATGCTACTTCCAATGGAACTTCACAGCCTGGTATTCTAGCAGTGGAATTTGACACAAGACACAATTTCAAAGAAGATGGCCCTGACAATCACGTTGGCATCAACATAAACAGCATCAACTCCATTCAACAGGTTTCGTTAATAAATACTCGGCTCAGTCTATCTTCAGGCCAAGATGTCAAATTTCACATTCAGTACATCAATGACACAATATCAGTTTTTTGTGCCATGAGTGGAACTTCTGAAGAATCTATGGAGACCCTATTGGTATCTCCACCTCTTAATTTGTCTTCCTTTCTTCAAAAGGAGGTTTACATTGGCTTCTCCGCCTCAACAAGTAACTACACGGAGAGGAACTGTGTCAGATCGTGGGAATTCAGCGGGGATGATATTAGGGATGATGACAAAAGTCTCTTGTGGGTTTATGTTGCCGTTCCAATCGTGATTGTTTCAATTATCATTGGTGGGTTGGCGATCTTTTTCTTGCGCTGGCAAAAGACTCGCCATATGGAGGGGCCAGAAGATGCATATCCAAGGATAGAGGATCAGATTAAATATTCCTCTATGGCTCCGAAGAAGTTTAGGCTAAGGGAACTAACGAAGGCAACTGGTGGATTCAGCCTTCAAAACAAGCTTGGACAAGGCGGGTTTGGAACTGTGTATAAGGGGCTACTGGAAAATAAGGAGGTAGCTGTAAAGAGAGTTTCCAAGAACTCACGCCAAGGGAAGCAAGAGTTTTTGGCAGAAGTGACAACAATCGGAAGCCTTCACCATAGAAATTTGGTGAAACTCACTGGTTGGTGCTATGAGAATAGAGAGCTTCTCCTTGTGTACGAGTTCATGCCTAATGGAAGCCTAGACAAGTACCTCTTTNGTGACAAAGNTTGTGGTNATAATTATGACTTTGAAGGAGGGTATNCTATAACGTTGGACTGGGAAACTAGGNNAAGAGTGATTCATGGGGTNGCTCAAGCACTTGACTACCTTCACGATGGNTGNGAGAGGAGNGTTCTCCACAGAGANATCAAGGCCAGCAACATAATGCTNGACTCAGATTACAATGCCAAGCTGGGAGANTTTGGATTGGCTAGAACAATTCAGAAGAGAAATGAAACGCATCACTCTACAAAAGAGATTGCAGGCACACCCGGGTACATGGCCCCAGAAACCTTCCTGACTGGGAGGGCAACGGTGGAGACAGATGTGTATGCATTTGGGGTTCTTGTGTTGGAAGTAGTGTGTGGAAAGAGGCCATGGAATGTGTATGCACAAGATGACTACGAGAACAGCATTGTGTATCGGGTATGGGATTTGTATGGGAAGGGAAAAGTAGTTGGTGCTGTTGATGGAAGGTTGAAGAAGGAGGAGATTATGGAGGAAGAAGTGGACTGCGTTCTTGTTCTTGGCTTGGCTTGTTGCCATCCAAATCCACACAAAAGACTATCCATGAGAACAGTTCTTCAGGTTCTGAATGGAGAAGCACCTCCACCTGAAGTGCCTAAGGAAAGACCAGTTTTTATGTGGCCTGCTATCCCTCCATCCTTTAAAGATGCTGAAGATAGCTCCCTCATCCAGGGAACACTCACTCCTTTCACTGAAATCATTGGAAGATGA | 2100 | 0.4314 | MIYINKGMMHHKHLKLRIGLQKSSHSLPFQNGNMQIPWIVKYHYAATLFFVTVALTKVTCFQFNFPSFPDDSNLLLLGSSRIFLDAIQVTLDSRGTIENYSGRALYRKPYQLWNQNQIASFNTTFVLRITPETTPGGEGLAFILTSDRTVPENSDGQWIGIVNATSNGTSQPGILAVEFDTRHNFKEDGPDNHVGININSINSIQQVSLINTRLSLSSGQDVKFHIQYINDTISVFCAMSGTSEESMETLLVSPPLNLSSFLQKEVYIGFSASTSNYTERNCVRSWEFSGDDIRDDDKSLLWVYVAVPIVIVSIIIGGLAIFFLRWQKTRHMEGPEDAYPRIEDQIKYSSMAPKKFRLRELTKATGGFSLQNKLGQGGFGTVYKGLLENKEVAVKRVSKNSRQGKQEFLAEVTTIGSLHHRNLVKLTGWCYENRELLLVYEFMPNGSLDKYLFXDKXCGXNYDFEGGYXITLDWETRXRVIHGVAQALDYLHDGXERXVLHRXIKASNIMLDSDYNAKLGXFGLARTIQKRNETHHSTKEIAGTPGYMAPETFLTGRATVETDVYAFGVLVLEVVCGKRPWNVYAQDDYENSIVYRVWDLYGKGKVVGAVDGRLKKEEIMEEEVDCVLVLGLACCHPNPHKRLSMRTVLQVLNGEAPPPEVPKERPVFMWPAIPPSFKDAEDSSLIQGTLTPFTEIIGR* | 700 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra8g0228 | 699 | SUPERFAMILY | Protein kinase-like (PK-like) | 349 | 652 | IPR011009 | - | |
Vra8g0228 | 699 | ProSiteProfiles | Protein kinase domain profile. | 368 | 668 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vra8g0228 | 699 | Gene3D | Phosphorylase Kinase; domain 1 | 353 | 442 | - | - | |
Vra8g0228 | 699 | Gene3D | - | 59 | 300 | - | - | |
Vra8g0228 | 699 | Gene3D | Transferase(Phosphotransferase) domain 1 | 443 | 672 | - | - | |
Vra8g0228 | 699 | ProSitePatterns | Legume lectins beta-chain signature. | 175 | 181 | IPR019825 | - | |
Vra8g0228 | 699 | CDD | STKc_IRAK | 374 | 654 | - | - | |
Vra8g0228 | 699 | CDD | lectin_legume_LecRK_Arcelin_ConA | 61 | 289 | IPR001220 | GO:0030246 | |
Vra8g0228 | 699 | PANTHER | - | 40 | 687 | - | - | |
Vra8g0228 | 699 | Pfam | Legume lectin domain | 62 | 297 | IPR001220 | GO:0030246 | |
Vra8g0228 | 699 | Pfam | Protein kinase domain | 369 | 650 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vra8g0228 | 699 | SUPERFAMILY | Concanavalin A-like lectins/glucanases | 59 | 295 | IPR013320 | - | |
Vra8g0228 | 699 | PANTHER | BINDING PROTEIN, PUTATIVE-RELATED | 40 | 687 | - | - | |
Vra8g0228 | 699 | ProSitePatterns | Protein kinases ATP-binding region signature. | 374 | 395 | IPR017441 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra8g0228 | Vra-Chr8 | 2800912 | 2803752 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra8g0228 | 48 | 667 | Receptor kinase-like Gene Family | AT5G10530 | 38.949 | 1.46e-121 | 375 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_L-LEC | Vra8g0228 | Pkinase | 2.8e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra8g0228 | - | - | pvu:PHAVU_007G260300g | 1118.99 |